Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM71Q2Q1W2 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM71Q2Q1W2 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM71Q2Q1W2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.68■□□□□ 0.58
TRIM71Q2Q1W2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM71Q2Q1W2 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM71Q2Q1W2 AJ011932.1-201ENST00000621707 465 ntBASIC18.68■□□□□ 0.58
TRIM71Q2Q1W2 AC084121.4-201ENST00000641598 221 ntBASIC18.68■□□□□ 0.58
TRIM71Q2Q1W2 AF228730.8-201ENST00000642140 221 ntBASIC18.68■□□□□ 0.58
TRIM71Q2Q1W2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM71Q2Q1W2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM71Q2Q1W2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM71Q2Q1W2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM71Q2Q1W2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM71Q2Q1W2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM71Q2Q1W2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
TRIM71Q2Q1W2 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM71Q2Q1W2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRIM71Q2Q1W2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM71Q2Q1W2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
TRIM71Q2Q1W2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM71Q2Q1W2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRIM71Q2Q1W2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
TRIM71Q2Q1W2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM71Q2Q1W2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM71Q2Q1W2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM71Q2Q1W2 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM71Q2Q1W2 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM71Q2Q1W2 AC055876.3-201ENST00000431496 288 ntBASIC18.67■□□□□ 0.58
TRIM71Q2Q1W2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
TRIM71Q2Q1W2 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM71Q2Q1W2 AC138649.4-201ENST00000612222 287 ntBASIC18.67■□□□□ 0.58
TRIM71Q2Q1W2 AL161645.1-201ENST00000622716 1255 ntBASIC18.67■□□□□ 0.58
TRIM71Q2Q1W2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.67■□□□□ 0.58
TRIM71Q2Q1W2 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM71Q2Q1W2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM71Q2Q1W2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM71Q2Q1W2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM71Q2Q1W2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM71Q2Q1W2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM71Q2Q1W2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM71Q2Q1W2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 AC092474.2-201ENST00000424288 719 ntBASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 AC093214.1-201ENST00000511688 1107 ntBASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 RNA5SP421-201ENST00000516864 134 ntBASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 AC109635.5-201ENST00000533593 962 ntBASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 TUBB3P1-201ENST00000405796 1332 ntBASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TRIM71Q2Q1W2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 LETM1P2-201ENST00000597330 2178 ntBASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 AC012569.1-201ENST00000591191 1524 ntBASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 RBPMS2P1-201ENST00000437762 623 ntBASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms