Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 AC015922.1-201ENST00000421102 1152 ntBASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 FAM86GP-201ENST00000448322 971 ntBASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 AC068137.2-201ENST00000605408 478 ntBASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 AL353135.1-201ENST00000606729 504 ntBASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 AC063926.2-201ENST00000623766 1308 ntBASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTC1Q2NKJ3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
CTC1Q2NKJ3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CTC1Q2NKJ3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CTC1Q2NKJ3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.39■□□□□ 0.54
CTC1Q2NKJ3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.39■□□□□ 0.54
CTC1Q2NKJ3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 AC080080.1-201ENST00000625121 2420 ntBASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 SLC25A6P5-201ENST00000435663 894 ntBASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 DUTP2-201ENST00000519164 463 ntBASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 AC019129.2-201ENST00000609837 1235 ntBASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 AL035252.4-201ENST00000624174 288 ntBASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTC1Q2NKJ3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTC1Q2NKJ3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTC1Q2NKJ3 AC012317.2-201ENST00000623305 2251 ntBASIC18.38■□□□□ 0.53
CTC1Q2NKJ3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.38■□□□□ 0.53
CTC1Q2NKJ3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTC1Q2NKJ3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTC1Q2NKJ3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.38■□□□□ 0.53
CTC1Q2NKJ3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CTC1Q2NKJ3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.38■□□□□ 0.53
CTC1Q2NKJ3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.38■□□□□ 0.53
CTC1Q2NKJ3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.38■□□□□ 0.53
CTC1Q2NKJ3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CTC1Q2NKJ3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.38■□□□□ 0.53
CTC1Q2NKJ3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CTC1Q2NKJ3 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.38■□□□□ 0.53
CTC1Q2NKJ3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.38■□□□□ 0.53
CTC1Q2NKJ3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.38■□□□□ 0.53
CTC1Q2NKJ3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CTC1Q2NKJ3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.38■□□□□ 0.53
CTC1Q2NKJ3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms