Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.94■□□□□ 0.62
KCNA1Q09470 AL589182.2-201ENST00000619332 1049 ntBASIC18.94■□□□□ 0.62
KCNA1Q09470 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA1Q09470 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA1Q09470 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA1Q09470 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA1Q09470 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA1Q09470 AL590787.1-201ENST00000568856 1315 ntBASIC18.94■□□□□ 0.62
KCNA1Q09470 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
KCNA1Q09470 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA1Q09470 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA1Q09470 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.94■□□□□ 0.62
KCNA1Q09470 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA1Q09470 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA1Q09470 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KCNA1Q09470 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
KCNA1Q09470 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
KCNA1Q09470 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.93■□□□□ 0.62
KCNA1Q09470 AC092068.3-201ENST00000587894 2016 ntBASIC18.93■□□□□ 0.62
KCNA1Q09470 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KCNA1Q09470 NCF1C-201ENST00000438382 1427 ntBASIC18.93■□□□□ 0.62
KCNA1Q09470 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNA1Q09470 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
KCNA1Q09470 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
KCNA1Q09470 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNA1Q09470 KRT18P67-201ENST00000432816 1264 ntBASIC18.93■□□□□ 0.62
KCNA1Q09470 RNA5SP419-201ENST00000515908 135 ntBASIC18.93■□□□□ 0.62
KCNA1Q09470 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.93■□□□□ 0.62
KCNA1Q09470 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.93■□□□□ 0.62
KCNA1Q09470 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.93■□□□□ 0.62
KCNA1Q09470 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
KCNA1Q09470 AL049840.3-201ENST00000602669 611 ntBASIC18.93■□□□□ 0.62
KCNA1Q09470 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.93■□□□□ 0.62
KCNA1Q09470 AC004706.3-202ENST00000621574 984 ntBASIC18.93■□□□□ 0.62
KCNA1Q09470 AC107918.4-202ENST00000641623 219 ntBASIC18.93■□□□□ 0.62
KCNA1Q09470 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNA1Q09470 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNA1Q09470 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
KCNA1Q09470 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KCNA1Q09470 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.93■□□□□ 0.62
KCNA1Q09470 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNA1Q09470 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.92■□□□□ 0.62
KCNA1Q09470 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KCNA1Q09470 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
KCNA1Q09470 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
KCNA1Q09470 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNA1Q09470 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNA1Q09470 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNA1Q09470 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNA1Q09470 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNA1Q09470 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
KCNA1Q09470 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.92■□□□□ 0.62
KCNA1Q09470 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.92■□□□□ 0.62
KCNA1Q09470 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.92■□□□□ 0.62
KCNA1Q09470 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNA1Q09470 TPM4P1-201ENST00000436100 807 ntBASIC18.92■□□□□ 0.62
KCNA1Q09470 AC073648.2-201ENST00000510116 352 ntBASIC18.92■□□□□ 0.62
KCNA1Q09470 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.92■□□□□ 0.62
KCNA1Q09470 SLC25A6P4-201ENST00000586535 553 ntBASIC18.92■□□□□ 0.62
KCNA1Q09470 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.92■□□□□ 0.62
KCNA1Q09470 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
KCNA1Q09470 AC006504.4-201ENST00000592118 1568 ntBASIC18.92■□□□□ 0.62
KCNA1Q09470 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNA1Q09470 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KCNA1Q09470 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KCNA1Q09470 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNA1Q09470 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.91■□□□□ 0.62
KCNA1Q09470 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNA1Q09470 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
KCNA1Q09470 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNA1Q09470 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KCNA1Q09470 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNA1Q09470 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNA1Q09470 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KCNA1Q09470 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
KCNA1Q09470 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNA1Q09470 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNA1Q09470 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.91■□□□□ 0.62
KCNA1Q09470 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.91■□□□□ 0.62
KCNA1Q09470 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.91■□□□□ 0.62
KCNA1Q09470 AC139887.3-201ENST00000568585 713 ntBASIC18.91■□□□□ 0.62
KCNA1Q09470 AL139424.1-201ENST00000607572 797 ntBASIC18.91■□□□□ 0.62
KCNA1Q09470 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNA1Q09470 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KCNA1Q09470 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNA1Q09470 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.91■□□□□ 0.62
KCNA1Q09470 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.91■□□□□ 0.62
KCNA1Q09470 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KCNA1Q09470 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNA1Q09470 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
KCNA1Q09470 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.9■□□□□ 0.62
KCNA1Q09470 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNA1Q09470 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNA1Q09470 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNA1Q09470 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
KCNA1Q09470 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KCNA1Q09470 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.9■□□□□ 0.62
KCNA1Q09470 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KCNA1Q09470 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNA1Q09470 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms