Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC21.21■□□□□ 0.99
SCN7AQ01118 CYP2A7P1-201ENST00000595391 815 ntBASIC21.21■□□□□ 0.99
SCN7AQ01118 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SCN7AQ01118 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCN7AQ01118 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SCN7AQ01118 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.99
SCN7AQ01118 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
SCN7AQ01118 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC21.2■□□□□ 0.98
SCN7AQ01118 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SCN7AQ01118 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.2■□□□□ 0.98
SCN7AQ01118 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCN7AQ01118 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SCN7AQ01118 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCN7AQ01118 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCN7AQ01118 MIR346-201ENST00000362234 95 ntBASIC21.2■□□□□ 0.98
SCN7AQ01118 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC21.2■□□□□ 0.98
SCN7AQ01118 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC21.2■□□□□ 0.98
SCN7AQ01118 AC007274.1-201ENST00000439805 662 ntBASIC21.2■□□□□ 0.98
SCN7AQ01118 STARD13-205ENST00000439831 945 ntTSL 2 BASIC21.2■□□□□ 0.98
SCN7AQ01118 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC21.2■□□□□ 0.98
SCN7AQ01118 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC21.2■□□□□ 0.98
SCN7AQ01118 BANF1P1-201ENST00000553684 263 ntBASIC21.2■□□□□ 0.98
SCN7AQ01118 AC073389.1-201ENST00000595595 795 ntBASIC21.2■□□□□ 0.98
SCN7AQ01118 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCN7AQ01118 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SCN7AQ01118 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
SCN7AQ01118 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC21.2■□□□□ 0.98
SCN7AQ01118 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC21.2■□□□□ 0.98
SCN7AQ01118 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCN7AQ01118 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCN7AQ01118 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCN7AQ01118 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC21.2■□□□□ 0.98
SCN7AQ01118 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SCN7AQ01118 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCN7AQ01118 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCN7AQ01118 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SCN7AQ01118 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.19■□□□□ 0.98
SCN7AQ01118 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC21.19■□□□□ 0.98
SCN7AQ01118 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC21.19■□□□□ 0.98
SCN7AQ01118 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC21.19■□□□□ 0.98
SCN7AQ01118 NAA50-208ENST00000497255 789 ntTSL 5 BASIC21.19■□□□□ 0.98
SCN7AQ01118 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC21.19■□□□□ 0.98
SCN7AQ01118 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC21.19■□□□□ 0.98
SCN7AQ01118 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC21.19■□□□□ 0.98
SCN7AQ01118 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC21.19■□□□□ 0.98
SCN7AQ01118 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.19■□□□□ 0.98
SCN7AQ01118 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SCN7AQ01118 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SCN7AQ01118 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SCN7AQ01118 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCN7AQ01118 AC116353.5-201ENST00000638148 1699 ntBASIC21.19■□□□□ 0.98
SCN7AQ01118 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC21.19■□□□□ 0.98
SCN7AQ01118 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCN7AQ01118 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCN7AQ01118 FOS-208ENST00000555686 1496 ntTSL 2 BASIC21.19■□□□□ 0.98
SCN7AQ01118 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SCN7AQ01118 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SCN7AQ01118 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.19■□□□□ 0.98
SCN7AQ01118 AC022144.1-201ENST00000602255 1580 ntBASIC21.19■□□□□ 0.98
SCN7AQ01118 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCN7AQ01118 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SCN7AQ01118 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SCN7AQ01118 COX5BP8-201ENST00000416911 349 ntBASIC21.18■□□□□ 0.98
SCN7AQ01118 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC21.18■□□□□ 0.98
SCN7AQ01118 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC21.18■□□□□ 0.98
SCN7AQ01118 RN7SL692P-201ENST00000464677 288 ntBASIC21.18■□□□□ 0.98
SCN7AQ01118 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC21.18■□□□□ 0.98
SCN7AQ01118 MIR4453-201ENST00000584019 89 ntBASIC21.18■□□□□ 0.98
SCN7AQ01118 SIGLEC29P-201ENST00000599873 1114 ntBASIC21.18■□□□□ 0.98
SCN7AQ01118 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCN7AQ01118 AC025048.6-201ENST00000634326 1161 ntBASIC21.18■□□□□ 0.98
SCN7AQ01118 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCN7AQ01118 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC21.18■□□□□ 0.98
SCN7AQ01118 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SCN7AQ01118 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.18■□□□□ 0.98
SCN7AQ01118 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC21.18■□□□□ 0.98
SCN7AQ01118 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SCN7AQ01118 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SCN7AQ01118 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC21.18■□□□□ 0.98
SCN7AQ01118 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC21.18■□□□□ 0.98
SCN7AQ01118 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SCN7AQ01118 AL138828.2-201ENST00000615812 383 ntBASIC21.18■□□□□ 0.98
SCN7AQ01118 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCN7AQ01118 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC21.18■□□□□ 0.98
SCN7AQ01118 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC21.18■□□□□ 0.98
SCN7AQ01118 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SCN7AQ01118 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC21.17■□□□□ 0.98
SCN7AQ01118 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SCN7AQ01118 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SCN7AQ01118 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCN7AQ01118 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCN7AQ01118 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SCN7AQ01118 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SCN7AQ01118 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC21.17■□□□□ 0.98
SCN7AQ01118 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SCN7AQ01118 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCN7AQ01118 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC21.17■□□□□ 0.98
SCN7AQ01118 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC21.17■□□□□ 0.98
SCN7AQ01118 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC21.17■□□□□ 0.98
SCN7AQ01118 RARRES2P9-201ENST00000565168 469 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms