Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HSPG2P98160 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
HSPG2P98160 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
HSPG2P98160 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
HSPG2P98160 AC044860.1-202ENST00000559481 777 ntBASIC10.51□□□□□ -0.73
HSPG2P98160 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
HSPG2P98160 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC10.51□□□□□ -0.73
HSPG2P98160 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
HSPG2P98160 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC10.51□□□□□ -0.73
HSPG2P98160 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
HSPG2P98160 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HSPG2P98160 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
HSPG2P98160 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HSPG2P98160 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
HSPG2P98160 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
HSPG2P98160 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC10.51□□□□□ -0.73
HSPG2P98160 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC10.51□□□□□ -0.73
HSPG2P98160 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
HSPG2P98160 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC10.51□□□□□ -0.73
HSPG2P98160 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
HSPG2P98160 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC10.51□□□□□ -0.73
HSPG2P98160 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC10.51□□□□□ -0.73
HSPG2P98160 AL079307.3-201ENST00000556114 283 ntBASIC10.51□□□□□ -0.73
HSPG2P98160 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC10.51□□□□□ -0.73
HSPG2P98160 AL133215.2-201ENST00000609242 977 ntBASIC10.51□□□□□ -0.73
HSPG2P98160 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC10.51□□□□□ -0.73
HSPG2P98160 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HSPG2P98160 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
HSPG2P98160 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
HSPG2P98160 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
HSPG2P98160 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
HSPG2P98160 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
HSPG2P98160 AMT-250ENST00000637682 1823 ntTSL 5 BASIC10.5□□□□□ -0.73
HSPG2P98160 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC10.5□□□□□ -0.73
HSPG2P98160 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
HSPG2P98160 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
HSPG2P98160 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
HSPG2P98160 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC10.5□□□□□ -0.73
HSPG2P98160 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC10.5□□□□□ -0.73
HSPG2P98160 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
HSPG2P98160 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
HSPG2P98160 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
HSPG2P98160 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
HSPG2P98160 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
HSPG2P98160 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC10.5□□□□□ -0.73
HSPG2P98160 AC023310.3-201ENST00000557027 670 ntBASIC10.5□□□□□ -0.73
HSPG2P98160 AC100756.1-201ENST00000562736 682 ntBASIC10.5□□□□□ -0.73
HSPG2P98160 AC138749.3-201ENST00000567691 622 ntBASIC10.5□□□□□ -0.73
HSPG2P98160 MIR4722-201ENST00000578292 60 ntBASIC10.5□□□□□ -0.73
HSPG2P98160 AL589739.1-201ENST00000607720 493 ntBASIC10.5□□□□□ -0.73
HSPG2P98160 AC116165.1-201ENST00000611806 668 ntBASIC10.5□□□□□ -0.73
HSPG2P98160 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
HSPG2P98160 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC10.5□□□□□ -0.73
HSPG2P98160 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
HSPG2P98160 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC10.5□□□□□ -0.73
HSPG2P98160 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
HSPG2P98160 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
HSPG2P98160 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC10.5□□□□□ -0.73
HSPG2P98160 AC005229.1-201ENST00000392885 409 ntBASIC10.5□□□□□ -0.73
HSPG2P98160 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
HSPG2P98160 MIR1247-201ENST00000408206 136 ntBASIC10.5□□□□□ -0.73
HSPG2P98160 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
HSPG2P98160 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
HSPG2P98160 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
HSPG2P98160 TEX48-202ENST00000612244 662 ntTSL 3 BASIC10.5□□□□□ -0.73
HSPG2P98160 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
HSPG2P98160 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
HSPG2P98160 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC10.5□□□□□ -0.73
HSPG2P98160 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC10.5□□□□□ -0.73
HSPG2P98160 AC092978.1-202ENST00000637590 1327 ntBASIC10.5□□□□□ -0.73
HSPG2P98160 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
HSPG2P98160 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
HSPG2P98160 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
HSPG2P98160 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC10.49□□□□□ -0.73
HSPG2P98160 GOLGA2P4-201ENST00000441462 777 ntBASIC10.49□□□□□ -0.73
HSPG2P98160 AC055876.2-201ENST00000531834 546 ntBASIC10.49□□□□□ -0.73
HSPG2P98160 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC10.49□□□□□ -0.73
HSPG2P98160 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC10.49□□□□□ -0.73
HSPG2P98160 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC10.49□□□□□ -0.73
HSPG2P98160 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC10.49□□□□□ -0.73
HSPG2P98160 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC10.49□□□□□ -0.73
HSPG2P98160 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC10.49□□□□□ -0.73
HSPG2P98160 AC007431.3-201ENST00000623221 587 ntBASIC10.49□□□□□ -0.73
HSPG2P98160 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
HSPG2P98160 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
HSPG2P98160 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC10.49□□□□□ -0.73
HSPG2P98160 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC10.49□□□□□ -0.73
HSPG2P98160 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
HSPG2P98160 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
HSPG2P98160 PDIA3P1-201ENST00000471856 1510 ntBASIC10.49□□□□□ -0.73
HSPG2P98160 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC10.49□□□□□ -0.73
HSPG2P98160 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
HSPG2P98160 CENPM-206ENST00000407253 818 ntTSL 2 BASIC10.49□□□□□ -0.73
HSPG2P98160 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC10.49□□□□□ -0.73
HSPG2P98160 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC10.49□□□□□ -0.73
HSPG2P98160 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC10.49□□□□□ -0.73
HSPG2P98160 RNA5SP412-201ENST00000516234 123 ntBASIC10.49□□□□□ -0.73
HSPG2P98160 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC10.49□□□□□ -0.73
HSPG2P98160 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
HSPG2P98160 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC10.49□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms