Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
H3F3AP84243 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.42■□□□□ 0.06
H3F3AP84243 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.42■□□□□ 0.06
H3F3AP84243 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.42■□□□□ 0.06
H3F3AP84243 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.42■□□□□ 0.06
H3F3AP84243 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
H3F3AP84243 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.42■□□□□ 0.06
H3F3AP84243 HNRNPDP1-201ENST00000439535 754 ntBASIC15.42■□□□□ 0.06
H3F3AP84243 AF186996.4-201ENST00000467186 377 ntBASIC15.42■□□□□ 0.06
H3F3AP84243 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.42■□□□□ 0.06
H3F3AP84243 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.42■□□□□ 0.06
H3F3AP84243 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.42■□□□□ 0.06
H3F3AP84243 AL139424.1-201ENST00000607572 797 ntBASIC15.42■□□□□ 0.06
H3F3AP84243 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
H3F3AP84243 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
H3F3AP84243 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.42■□□□□ 0.06
H3F3AP84243 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
H3F3AP84243 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
H3F3AP84243 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.42■□□□□ 0.06
H3F3AP84243 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
H3F3AP84243 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
H3F3AP84243 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.42■□□□□ 0.06
H3F3AP84243 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
H3F3AP84243 AL590787.1-201ENST00000568856 1315 ntBASIC15.42■□□□□ 0.06
H3F3AP84243 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
H3F3AP84243 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
H3F3AP84243 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
H3F3AP84243 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
H3F3AP84243 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
H3F3AP84243 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
H3F3AP84243 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.41■□□□□ 0.06
H3F3AP84243 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
H3F3AP84243 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H3F3AP84243 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
H3F3AP84243 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H3F3AP84243 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H3F3AP84243 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H3F3AP84243 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
H3F3AP84243 RPS2P1-201ENST00000434010 821 ntBASIC15.41■□□□□ 0.06
H3F3AP84243 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.41■□□□□ 0.06
H3F3AP84243 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
H3F3AP84243 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.41■□□□□ 0.06
H3F3AP84243 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.41■□□□□ 0.06
H3F3AP84243 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
H3F3AP84243 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.41■□□□□ 0.06
H3F3AP84243 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.41■□□□□ 0.06
H3F3AP84243 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
H3F3AP84243 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.41■□□□□ 0.06
H3F3AP84243 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
H3F3AP84243 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
H3F3AP84243 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H3F3AP84243 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
H3F3AP84243 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
H3F3AP84243 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
H3F3AP84243 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
H3F3AP84243 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.41■□□□□ 0.06
H3F3AP84243 AP001094.4-201ENST00000579008 2176 ntBASIC15.41■□□□□ 0.06
H3F3AP84243 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H3F3AP84243 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H3F3AP84243 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H3F3AP84243 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.4■□□□□ 0.06
H3F3AP84243 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H3F3AP84243 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
H3F3AP84243 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.4■□□□□ 0.06
H3F3AP84243 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.4■□□□□ 0.06
H3F3AP84243 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.4■□□□□ 0.06
H3F3AP84243 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.4■□□□□ 0.06
H3F3AP84243 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.4■□□□□ 0.06
H3F3AP84243 KRT18P27-201ENST00000427733 1299 ntBASIC15.4■□□□□ 0.06
H3F3AP84243 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.4■□□□□ 0.06
H3F3AP84243 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H3F3AP84243 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.4■□□□□ 0.06
H3F3AP84243 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.4■□□□□ 0.06
H3F3AP84243 OR7E14P-202ENST00000530490 1290 ntBASIC15.4■□□□□ 0.06
H3F3AP84243 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.4■□□□□ 0.06
H3F3AP84243 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.4■□□□□ 0.06
H3F3AP84243 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.4■□□□□ 0.06
H3F3AP84243 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.4■□□□□ 0.06
H3F3AP84243 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.4■□□□□ 0.06
H3F3AP84243 AC148477.8-201ENST00000624298 468 ntBASIC15.4■□□□□ 0.06
H3F3AP84243 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.4■□□□□ 0.06
H3F3AP84243 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H3F3AP84243 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
H3F3AP84243 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
H3F3AP84243 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H3F3AP84243 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.4■□□□□ 0.06
H3F3AP84243 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H3F3AP84243 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
H3F3AP84243 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H3F3AP84243 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H3F3AP84243 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H3F3AP84243 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.4■□□□□ 0.06
H3F3AP84243 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
H3F3AP84243 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
H3F3AP84243 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
H3F3AP84243 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
H3F3AP84243 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
H3F3AP84243 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H3F3AP84243 GPR89P-201ENST00000407924 1495 ntBASIC15.4■□□□□ 0.06
H3F3AP84243 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms