Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP1S1P61966 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
AP1S1P61966 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.34■□□□□ 0.37
AP1S1P61966 AC120114.3-201ENST00000611923 658 ntBASIC17.34■□□□□ 0.37
AP1S1P61966 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP1S1P61966 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP1S1P61966 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP1S1P61966 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
AP1S1P61966 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.33■□□□□ 0.37
AP1S1P61966 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
AP1S1P61966 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
AP1S1P61966 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP1S1P61966 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.33■□□□□ 0.37
AP1S1P61966 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
AP1S1P61966 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.33■□□□□ 0.37
AP1S1P61966 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.33■□□□□ 0.37
AP1S1P61966 PI4KAP1-204ENST00000612579 1703 ntBASIC17.33■□□□□ 0.37
AP1S1P61966 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP1S1P61966 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP1S1P61966 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
AP1S1P61966 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
AP1S1P61966 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
AP1S1P61966 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP1S1P61966 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP1S1P61966 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP1S1P61966 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP1S1P61966 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.33■□□□□ 0.36
AP1S1P61966 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.33■□□□□ 0.36
AP1S1P61966 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP1S1P61966 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP1S1P61966 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP1S1P61966 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.33■□□□□ 0.36
AP1S1P61966 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.33■□□□□ 0.36
AP1S1P61966 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.33■□□□□ 0.36
AP1S1P61966 UNC93B6-202ENST00000528242 690 ntBASIC17.33■□□□□ 0.36
AP1S1P61966 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.33■□□□□ 0.36
AP1S1P61966 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.33■□□□□ 0.36
AP1S1P61966 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.33■□□□□ 0.36
AP1S1P61966 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP1S1P61966 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP1S1P61966 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.33■□□□□ 0.36
AP1S1P61966 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP1S1P61966 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP1S1P61966 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP1S1P61966 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP1S1P61966 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP1S1P61966 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
AP1S1P61966 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
AP1S1P61966 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S1P61966 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
AP1S1P61966 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.32■□□□□ 0.36
AP1S1P61966 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S1P61966 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
AP1S1P61966 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S1P61966 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.32■□□□□ 0.36
AP1S1P61966 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S1P61966 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
AP1S1P61966 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.32■□□□□ 0.36
AP1S1P61966 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.32■□□□□ 0.36
AP1S1P61966 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S1P61966 PAWRP1-201ENST00000451083 565 ntBASIC17.32■□□□□ 0.36
AP1S1P61966 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S1P61966 RNA5SP415-201ENST00000517246 115 ntBASIC17.32■□□□□ 0.36
AP1S1P61966 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.32■□□□□ 0.36
AP1S1P61966 AC145285.3-201ENST00000564603 959 ntBASIC17.32■□□□□ 0.36
AP1S1P61966 Z83851.2-201ENST00000609564 659 ntBASIC17.32■□□□□ 0.36
AP1S1P61966 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S1P61966 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
AP1S1P61966 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S1P61966 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S1P61966 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
AP1S1P61966 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S1P61966 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S1P61966 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S1P61966 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S1P61966 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S1P61966 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.32■□□□□ 0.36
AP1S1P61966 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
AP1S1P61966 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.32■□□□□ 0.36
AP1S1P61966 LETM1P2-201ENST00000597330 2178 ntBASIC17.32■□□□□ 0.36
AP1S1P61966 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S1P61966 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S1P61966 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S1P61966 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S1P61966 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
AP1S1P61966 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
AP1S1P61966 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
AP1S1P61966 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S1P61966 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.31■□□□□ 0.36
AP1S1P61966 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S1P61966 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
AP1S1P61966 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S1P61966 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
AP1S1P61966 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.31■□□□□ 0.36
AP1S1P61966 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.31■□□□□ 0.36
AP1S1P61966 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.31■□□□□ 0.36
AP1S1P61966 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.31■□□□□ 0.36
AP1S1P61966 AC108073.2-201ENST00000464002 357 ntBASIC17.31■□□□□ 0.36
AP1S1P61966 AC108751.1-201ENST00000490852 363 ntBASIC17.31■□□□□ 0.36
AP1S1P61966 AC124947.2-201ENST00000547118 1133 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms