Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
VSX2P58304 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
VSX2P58304 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.53■□□□□ 0.24
VSX2P58304 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
VSX2P58304 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
VSX2P58304 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VSX2P58304 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
VSX2P58304 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
VSX2P58304 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.53■□□□□ 0.24
VSX2P58304 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
VSX2P58304 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
VSX2P58304 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VSX2P58304 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VSX2P58304 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VSX2P58304 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VSX2P58304 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VSX2P58304 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
VSX2P58304 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VSX2P58304 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VSX2P58304 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VSX2P58304 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VSX2P58304 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.52■□□□□ 0.24
VSX2P58304 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.52■□□□□ 0.24
VSX2P58304 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.52■□□□□ 0.24
VSX2P58304 AC073621.1-201ENST00000392730 636 ntBASIC16.52■□□□□ 0.24
VSX2P58304 KRT18P27-201ENST00000427733 1299 ntBASIC16.52■□□□□ 0.24
VSX2P58304 AP000347.1-202ENST00000435868 847 ntBASIC16.52■□□□□ 0.24
VSX2P58304 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.52■□□□□ 0.24
VSX2P58304 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VSX2P58304 AC136632.2-201ENST00000512891 861 ntBASIC16.52■□□□□ 0.24
VSX2P58304 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.52■□□□□ 0.24
VSX2P58304 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
VSX2P58304 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.52■□□□□ 0.24
VSX2P58304 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.52■□□□□ 0.24
VSX2P58304 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
VSX2P58304 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VSX2P58304 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
VSX2P58304 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
VSX2P58304 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VSX2P58304 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
VSX2P58304 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.51■□□□□ 0.23
VSX2P58304 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VSX2P58304 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
VSX2P58304 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.51■□□□□ 0.23
VSX2P58304 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
VSX2P58304 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VSX2P58304 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
VSX2P58304 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VSX2P58304 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
VSX2P58304 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VSX2P58304 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VSX2P58304 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VSX2P58304 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VSX2P58304 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.51■□□□□ 0.23
VSX2P58304 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.51■□□□□ 0.23
VSX2P58304 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.51■□□□□ 0.23
VSX2P58304 ACTG1P4-201ENST00000425123 1122 ntBASIC16.51■□□□□ 0.23
VSX2P58304 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VSX2P58304 RPL13AP23-201ENST00000480739 586 ntBASIC16.51■□□□□ 0.23
VSX2P58304 SLC25A1P1-201ENST00000528351 927 ntBASIC16.51■□□□□ 0.23
VSX2P58304 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.51■□□□□ 0.23
VSX2P58304 AL353135.1-201ENST00000606729 504 ntBASIC16.51■□□□□ 0.23
VSX2P58304 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.51■□□□□ 0.23
VSX2P58304 AC117500.6-201ENST00000624871 588 ntBASIC16.51■□□□□ 0.23
VSX2P58304 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VSX2P58304 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.51■□□□□ 0.23
VSX2P58304 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
VSX2P58304 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.51■□□□□ 0.23
VSX2P58304 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
VSX2P58304 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VSX2P58304 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.51■□□□□ 0.23
VSX2P58304 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VSX2P58304 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.51■□□□□ 0.23
VSX2P58304 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VSX2P58304 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VSX2P58304 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
VSX2P58304 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.5■□□□□ 0.23
VSX2P58304 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.5■□□□□ 0.23
VSX2P58304 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
VSX2P58304 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
VSX2P58304 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.5■□□□□ 0.23
VSX2P58304 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VSX2P58304 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VSX2P58304 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.5■□□□□ 0.23
VSX2P58304 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.5■□□□□ 0.23
VSX2P58304 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VSX2P58304 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.5■□□□□ 0.23
VSX2P58304 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
VSX2P58304 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.5■□□□□ 0.23
VSX2P58304 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.5■□□□□ 0.23
VSX2P58304 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.5■□□□□ 0.23
VSX2P58304 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.5■□□□□ 0.23
VSX2P58304 IGHV3-22-201ENST00000520721 359 ntBASIC16.5■□□□□ 0.23
VSX2P58304 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.5■□□□□ 0.23
VSX2P58304 AC005593.1-201ENST00000624894 515 ntBASIC16.5■□□□□ 0.23
VSX2P58304 AF228730.7-201ENST00000641842 219 ntBASIC16.5■□□□□ 0.23
VSX2P58304 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VSX2P58304 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
VSX2P58304 AL138688.1-201ENST00000624851 1594 ntBASIC16.5■□□□□ 0.23
VSX2P58304 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms