Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.05■□□□□ 0.64
BRCA2P51587 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.05■□□□□ 0.64
BRCA2P51587 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
BRCA2P51587 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.05■□□□□ 0.64
BRCA2P51587 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.05■□□□□ 0.64
BRCA2P51587 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.05■□□□□ 0.64
BRCA2P51587 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
BRCA2P51587 AC008738.7-201ENST00000609744 511 ntBASIC19.05■□□□□ 0.64
BRCA2P51587 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.05■□□□□ 0.64
BRCA2P51587 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.05■□□□□ 0.64
BRCA2P51587 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.05■□□□□ 0.64
BRCA2P51587 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.05■□□□□ 0.64
BRCA2P51587 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRCA2P51587 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.05■□□□□ 0.64
BRCA2P51587 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.05■□□□□ 0.64
BRCA2P51587 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRCA2P51587 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.05■□□□□ 0.64
BRCA2P51587 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRCA2P51587 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
BRCA2P51587 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
BRCA2P51587 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.05■□□□□ 0.64
BRCA2P51587 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BRCA2P51587 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BRCA2P51587 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.05■□□□□ 0.64
BRCA2P51587 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
BRCA2P51587 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRCA2P51587 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRCA2P51587 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.04■□□□□ 0.64
BRCA2P51587 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRCA2P51587 FOXO1B-201ENST00000504678 1527 ntBASIC19.04■□□□□ 0.64
BRCA2P51587 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
BRCA2P51587 RPF1-202ENST00000370656 724 ntTSL 2 BASIC19.04■□□□□ 0.64
BRCA2P51587 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
BRCA2P51587 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BRCA2P51587 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.04■□□□□ 0.64
BRCA2P51587 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC19.04■□□□□ 0.64
BRCA2P51587 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.04■□□□□ 0.64
BRCA2P51587 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
BRCA2P51587 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
BRCA2P51587 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.04■□□□□ 0.64
BRCA2P51587 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
BRCA2P51587 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.04■□□□□ 0.64
BRCA2P51587 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRCA2P51587 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRCA2P51587 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.04■□□□□ 0.64
BRCA2P51587 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.04■□□□□ 0.64
BRCA2P51587 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRCA2P51587 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BRCA2P51587 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRCA2P51587 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRCA2P51587 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRCA2P51587 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.04■□□□□ 0.64
BRCA2P51587 RN7SL837P-201ENST00000463010 287 ntBASIC19.04■□□□□ 0.64
BRCA2P51587 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.04■□□□□ 0.64
BRCA2P51587 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC19.04■□□□□ 0.64
BRCA2P51587 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.04■□□□□ 0.64
BRCA2P51587 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRCA2P51587 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.04■□□□□ 0.64
BRCA2P51587 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
BRCA2P51587 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRCA2P51587 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
BRCA2P51587 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.04■□□□□ 0.64
BRCA2P51587 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
BRCA2P51587 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRCA2P51587 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.03■□□□□ 0.64
BRCA2P51587 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.03■□□□□ 0.64
BRCA2P51587 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.03■□□□□ 0.64
BRCA2P51587 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
BRCA2P51587 AC012317.2-201ENST00000623305 2251 ntBASIC19.03■□□□□ 0.64
BRCA2P51587 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRCA2P51587 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRCA2P51587 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRCA2P51587 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRCA2P51587 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRCA2P51587 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
BRCA2P51587 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.03■□□□□ 0.64
BRCA2P51587 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRCA2P51587 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.03■□□□□ 0.64
BRCA2P51587 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
BRCA2P51587 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRCA2P51587 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC19.03■□□□□ 0.64
BRCA2P51587 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.03■□□□□ 0.64
BRCA2P51587 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
BRCA2P51587 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.03■□□□□ 0.64
BRCA2P51587 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC19.03■□□□□ 0.64
BRCA2P51587 AL161645.1-201ENST00000622716 1255 ntBASIC19.03■□□□□ 0.64
BRCA2P51587 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
BRCA2P51587 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
BRCA2P51587 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRCA2P51587 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRCA2P51587 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.02■□□□□ 0.64
BRCA2P51587 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BRCA2P51587 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.02■□□□□ 0.64
BRCA2P51587 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC19.02■□□□□ 0.64
BRCA2P51587 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.02■□□□□ 0.64
BRCA2P51587 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BRCA2P51587 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRCA2P51587 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRCA2P51587 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BRCA2P51587 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms