Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
USP6P35125 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
USP6P35125 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP6P35125 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
USP6P35125 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP6P35125 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC23.03■■□□□ 1.28
USP6P35125 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP6P35125 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP6P35125 MIR346-201ENST00000362234 95 ntBASIC23.03■■□□□ 1.28
USP6P35125 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC23.03■■□□□ 1.28
USP6P35125 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC23.03■■□□□ 1.28
USP6P35125 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
USP6P35125 AC236430.1-201ENST00000402231 743 ntBASIC23.03■■□□□ 1.28
USP6P35125 BASP1P1-201ENST00000430708 665 ntBASIC23.03■■□□□ 1.28
USP6P35125 PNKD-204ENST00000436005 978 ntTSL 5 BASIC23.03■■□□□ 1.28
USP6P35125 AC002472.2-201ENST00000442739 958 ntBASIC23.03■■□□□ 1.28
USP6P35125 ALG1L8P-201ENST00000533887 760 ntBASIC23.03■■□□□ 1.28
USP6P35125 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC23.03■■□□□ 1.28
USP6P35125 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC23.03■■□□□ 1.28
USP6P35125 WT1-AS_2.1-201ENST00000613208 137 ntBASIC23.03■■□□□ 1.28
USP6P35125 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP6P35125 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP6P35125 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP6P35125 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP6P35125 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP6P35125 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP6P35125 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC23.03■■□□□ 1.28
USP6P35125 AC116353.5-201ENST00000638148 1699 ntBASIC23.03■■□□□ 1.28
USP6P35125 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
USP6P35125 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC23.03■■□□□ 1.28
USP6P35125 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP6P35125 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
USP6P35125 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP6P35125 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC23.02■■□□□ 1.28
USP6P35125 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
USP6P35125 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
USP6P35125 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
USP6P35125 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
USP6P35125 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
USP6P35125 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC23.02■■□□□ 1.28
USP6P35125 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC23.02■■□□□ 1.28
USP6P35125 SPDYE7P-202ENST00000420373 878 ntBASIC23.02■■□□□ 1.28
USP6P35125 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
USP6P35125 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC23.02■■□□□ 1.28
USP6P35125 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC23.02■■□□□ 1.28
USP6P35125 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC23.02■■□□□ 1.28
USP6P35125 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC23.02■■□□□ 1.28
USP6P35125 AL390754.1-201ENST00000619088 582 ntBASIC23.02■■□□□ 1.28
USP6P35125 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC23.02■■□□□ 1.28
USP6P35125 AC093525.9-201ENST00000624961 1746 ntBASIC23.02■■□□□ 1.28
USP6P35125 LINC00895-201ENST00000629028 1637 ntBASIC23.02■■□□□ 1.28
USP6P35125 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
USP6P35125 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
USP6P35125 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
USP6P35125 FOS-208ENST00000555686 1496 ntTSL 2 BASIC23.02■■□□□ 1.28
USP6P35125 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC23.02■■□□□ 1.28
USP6P35125 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.02■■□□□ 1.28
USP6P35125 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC23.02■■□□□ 1.27
USP6P35125 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC23.02■■□□□ 1.27
USP6P35125 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP6P35125 AC131009.4-201ENST00000624048 1740 ntBASIC23.01■■□□□ 1.27
USP6P35125 AC008764.6-201ENST00000595909 2069 ntBASIC23.01■■□□□ 1.27
USP6P35125 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
USP6P35125 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
USP6P35125 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
USP6P35125 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC23.01■■□□□ 1.27
USP6P35125 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
USP6P35125 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
USP6P35125 AC092580.3-201ENST00000430932 139 ntBASIC23.01■■□□□ 1.27
USP6P35125 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC23.01■■□□□ 1.27
USP6P35125 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC23.01■■□□□ 1.27
USP6P35125 RN7SL204P-201ENST00000582831 262 ntBASIC23.01■■□□□ 1.27
USP6P35125 AC027307.2-201ENST00000591252 911 ntBASIC23.01■■□□□ 1.27
USP6P35125 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC23.01■■□□□ 1.27
USP6P35125 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
USP6P35125 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC23.01■■□□□ 1.27
USP6P35125 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
USP6P35125 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
USP6P35125 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC23.01■■□□□ 1.27
USP6P35125 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP6P35125 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP6P35125 TPR-209ENST00000613151 2478 ntTSL 5 BASIC23.01■■□□□ 1.27
USP6P35125 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
USP6P35125 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP6P35125 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
USP6P35125 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC23■■□□□ 1.27
USP6P35125 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC23■■□□□ 1.27
USP6P35125 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
USP6P35125 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC23■■□□□ 1.27
USP6P35125 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC23■■□□□ 1.27
USP6P35125 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
USP6P35125 WBP2-203ENST00000433525 928 ntTSL 2 BASIC23■■□□□ 1.27
USP6P35125 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC23■■□□□ 1.27
USP6P35125 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC23■■□□□ 1.27
USP6P35125 INGX-202ENST00000489074 768 ntBASIC23■■□□□ 1.27
USP6P35125 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC23■■□□□ 1.27
USP6P35125 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC23■■□□□ 1.27
USP6P35125 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
USP6P35125 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
USP6P35125 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms