Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSP1P33241 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSP1P33241 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSP1P33241 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSP1P33241 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSP1P33241 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSP1P33241 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSP1P33241 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSP1P33241 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LSP1P33241 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSP1P33241 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSP1P33241 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LSP1P33241 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSP1P33241 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSP1P33241 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.34■□□□□ 0.37
LSP1P33241 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.34■□□□□ 0.37
LSP1P33241 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.34■□□□□ 0.37
LSP1P33241 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.34■□□□□ 0.37
LSP1P33241 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSP1P33241 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.34■□□□□ 0.37
LSP1P33241 AP003097.1-201ENST00000530657 1135 ntBASIC17.34■□□□□ 0.37
LSP1P33241 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.34■□□□□ 0.37
LSP1P33241 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.34■□□□□ 0.37
LSP1P33241 AC233263.1-201ENST00000578059 224 ntBASIC17.34■□□□□ 0.37
LSP1P33241 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
LSP1P33241 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LSP1P33241 AC010240.3-201ENST00000607688 395 ntBASIC17.34■□□□□ 0.37
LSP1P33241 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSP1P33241 AC112497.1-201ENST00000624824 639 ntBASIC17.34■□□□□ 0.37
LSP1P33241 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.34■□□□□ 0.37
LSP1P33241 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LSP1P33241 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSP1P33241 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
LSP1P33241 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSP1P33241 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSP1P33241 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSP1P33241 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSP1P33241 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSP1P33241 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSP1P33241 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
LSP1P33241 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LSP1P33241 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSP1P33241 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
LSP1P33241 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSP1P33241 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSP1P33241 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.33■□□□□ 0.36
LSP1P33241 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LSP1P33241 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.33■□□□□ 0.36
LSP1P33241 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LSP1P33241 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LSP1P33241 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LSP1P33241 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.33■□□□□ 0.36
LSP1P33241 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
LSP1P33241 MESTP1-201ENST00000404287 994 ntBASIC17.33■□□□□ 0.36
LSP1P33241 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.33■□□□□ 0.36
LSP1P33241 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.33■□□□□ 0.36
LSP1P33241 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.33■□□□□ 0.36
LSP1P33241 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.33■□□□□ 0.36
LSP1P33241 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
LSP1P33241 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LSP1P33241 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LSP1P33241 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.33■□□□□ 0.36
LSP1P33241 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LSP1P33241 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LSP1P33241 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LSP1P33241 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
LSP1P33241 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LSP1P33241 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.33■□□□□ 0.36
LSP1P33241 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.32■□□□□ 0.36
LSP1P33241 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LSP1P33241 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LSP1P33241 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LSP1P33241 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.32■□□□□ 0.36
LSP1P33241 AC006538.1-201ENST00000567905 1585 ntBASIC17.32■□□□□ 0.36
LSP1P33241 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSP1P33241 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LSP1P33241 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSP1P33241 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSP1P33241 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.32■□□□□ 0.36
LSP1P33241 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSP1P33241 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LSP1P33241 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.32■□□□□ 0.36
LSP1P33241 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSP1P33241 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSP1P33241 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LSP1P33241 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LSP1P33241 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.32■□□□□ 0.36
LSP1P33241 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LSP1P33241 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSP1P33241 KRT17P3-201ENST00000420566 1262 ntBASIC17.32■□□□□ 0.36
LSP1P33241 MFAP1P1-201ENST00000442257 1255 ntBASIC17.32■□□□□ 0.36
LSP1P33241 AC026366.1-201ENST00000488803 879 ntBASIC17.32■□□□□ 0.36
LSP1P33241 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LSP1P33241 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.32■□□□□ 0.36
LSP1P33241 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.32■□□□□ 0.36
LSP1P33241 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.32■□□□□ 0.36
LSP1P33241 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.32■□□□□ 0.36
LSP1P33241 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LSP1P33241 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LSP1P33241 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms