Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.6■□□□□ 0.73
CNGA1P29973 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.6■□□□□ 0.73
CNGA1P29973 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNGA1P29973 HLA-J-203ENST00000494367 1087 ntBASIC19.6■□□□□ 0.73
CNGA1P29973 AC109322.1-201ENST00000524499 1264 ntBASIC19.6■□□□□ 0.73
CNGA1P29973 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.6■□□□□ 0.73
CNGA1P29973 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.6■□□□□ 0.73
CNGA1P29973 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.6■□□□□ 0.73
CNGA1P29973 REXO1L3P-201ENST00000622202 1288 ntBASIC19.6■□□□□ 0.73
CNGA1P29973 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.6■□□□□ 0.73
CNGA1P29973 LTB4R2-202ENST00000528054 3092 ntBASIC19.6■□□□□ 0.73
CNGA1P29973 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNGA1P29973 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNGA1P29973 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
CNGA1P29973 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.6■□□□□ 0.73
CNGA1P29973 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNGA1P29973 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.6■□□□□ 0.73
CNGA1P29973 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CNGA1P29973 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.6■□□□□ 0.73
CNGA1P29973 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNGA1P29973 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNGA1P29973 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
CNGA1P29973 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.59■□□□□ 0.73
CNGA1P29973 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CNGA1P29973 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNGA1P29973 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CNGA1P29973 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CNGA1P29973 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNGA1P29973 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CNGA1P29973 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNGA1P29973 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CNGA1P29973 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CNGA1P29973 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CNGA1P29973 PAWRP1-201ENST00000451083 565 ntBASIC19.59■□□□□ 0.73
CNGA1P29973 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.59■□□□□ 0.73
CNGA1P29973 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.59■□□□□ 0.73
CNGA1P29973 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.59■□□□□ 0.73
CNGA1P29973 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.59■□□□□ 0.73
CNGA1P29973 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CNGA1P29973 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.59■□□□□ 0.73
CNGA1P29973 LINC00628-201ENST00000628516 1289 ntBASIC19.59■□□□□ 0.73
CNGA1P29973 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNGA1P29973 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.59■□□□□ 0.73
CNGA1P29973 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.59■□□□□ 0.73
CNGA1P29973 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.59■□□□□ 0.73
CNGA1P29973 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.59■□□□□ 0.73
CNGA1P29973 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNGA1P29973 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CNGA1P29973 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CNGA1P29973 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
CNGA1P29973 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CNGA1P29973 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CNGA1P29973 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CNGA1P29973 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
CNGA1P29973 FAM86GP-201ENST00000448322 971 ntBASIC19.58■□□□□ 0.72
CNGA1P29973 AL513480.1-201ENST00000451731 511 ntBASIC19.58■□□□□ 0.72
CNGA1P29973 AC023141.5-201ENST00000458585 616 ntBASIC19.58■□□□□ 0.72
CNGA1P29973 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.58■□□□□ 0.72
CNGA1P29973 AC005498.2-205ENST00000593218 784 ntBASIC19.58■□□□□ 0.72
CNGA1P29973 AC022145.2-201ENST00000598203 171 ntBASIC19.58■□□□□ 0.72
CNGA1P29973 AC018470.1-201ENST00000624790 3129 ntBASIC19.58■□□□□ 0.72
CNGA1P29973 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNGA1P29973 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CNGA1P29973 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CNGA1P29973 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNGA1P29973 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNGA1P29973 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNGA1P29973 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CNGA1P29973 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CNGA1P29973 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNGA1P29973 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CNGA1P29973 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CNGA1P29973 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNGA1P29973 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNGA1P29973 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.57■□□□□ 0.72
CNGA1P29973 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNGA1P29973 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNGA1P29973 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.57■□□□□ 0.72
CNGA1P29973 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CNGA1P29973 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.57■□□□□ 0.72
CNGA1P29973 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CNGA1P29973 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.57■□□□□ 0.72
CNGA1P29973 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CNGA1P29973 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.57■□□□□ 0.72
CNGA1P29973 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CNGA1P29973 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNGA1P29973 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CNGA1P29973 MIR4745-201ENST00000577608 62 ntBASIC19.57■□□□□ 0.72
CNGA1P29973 AC138761.1-201ENST00000584393 385 ntBASIC19.57■□□□□ 0.72
CNGA1P29973 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.57■□□□□ 0.72
CNGA1P29973 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.57■□□□□ 0.72
CNGA1P29973 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.57■□□□□ 0.72
CNGA1P29973 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNGA1P29973 AC092919.2-201ENST00000623631 1645 ntBASIC19.57■□□□□ 0.72
CNGA1P29973 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CNGA1P29973 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNGA1P29973 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.57■□□□□ 0.72
CNGA1P29973 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNGA1P29973 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNGA1P29973 AC006116.8-202ENST00000587620 1550 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms