Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.85□□□□□ -0.03
CD40P25942 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CD40P25942 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.85□□□□□ -0.03
CD40P25942 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CD40P25942 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD40P25942 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD40P25942 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CD40P25942 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CD40P25942 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
CD40P25942 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD40P25942 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD40P25942 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD40P25942 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD40P25942 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD40P25942 IGLL3P-201ENST00000412472 434 ntBASIC14.85□□□□□ -0.03
CD40P25942 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.85□□□□□ -0.03
CD40P25942 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.85□□□□□ -0.03
CD40P25942 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.85□□□□□ -0.03
CD40P25942 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.85□□□□□ -0.03
CD40P25942 AC018845.2-201ENST00000568326 409 ntBASIC14.85□□□□□ -0.03
CD40P25942 MIR3687-2-201ENST00000577708 61 ntBASIC14.85□□□□□ -0.03
CD40P25942 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.85□□□□□ -0.03
CD40P25942 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.85□□□□□ -0.03
CD40P25942 MIR3687-1-201ENST00000614492 61 ntBASIC14.85□□□□□ -0.03
CD40P25942 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD40P25942 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD40P25942 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CD40P25942 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.85□□□□□ -0.03
CD40P25942 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CD40P25942 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD40P25942 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD40P25942 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CD40P25942 AC007613.1-201ENST00000572811 2597 ntBASIC14.84□□□□□ -0.03
CD40P25942 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD40P25942 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD40P25942 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CD40P25942 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD40P25942 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.84□□□□□ -0.03
CD40P25942 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD40P25942 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD40P25942 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD40P25942 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CD40P25942 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.84□□□□□ -0.03
CD40P25942 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
CD40P25942 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD40P25942 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CD40P25942 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.84□□□□□ -0.03
CD40P25942 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.84□□□□□ -0.03
CD40P25942 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CD40P25942 UPF3AP3-201ENST00000420996 769 ntBASIC14.84□□□□□ -0.03
CD40P25942 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.84□□□□□ -0.03
CD40P25942 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CD40P25942 PAWRP1-201ENST00000451083 565 ntBASIC14.84□□□□□ -0.03
CD40P25942 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.84□□□□□ -0.03
CD40P25942 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.84□□□□□ -0.03
CD40P25942 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD40P25942 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CD40P25942 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.84□□□□□ -0.03
CD40P25942 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CD40P25942 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.84□□□□□ -0.03
CD40P25942 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.84□□□□□ -0.03
CD40P25942 AC096734.2-201ENST00000562054 433 ntBASIC14.84□□□□□ -0.03
CD40P25942 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.84□□□□□ -0.03
CD40P25942 AC010327.4-202ENST00000591484 748 ntBASIC14.84□□□□□ -0.03
CD40P25942 MTDHP5-201ENST00000598980 586 ntBASIC14.84□□□□□ -0.03
CD40P25942 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.84□□□□□ -0.03
CD40P25942 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.84□□□□□ -0.03
CD40P25942 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.84□□□□□ -0.03
CD40P25942 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD40P25942 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.84□□□□□ -0.03
CD40P25942 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD40P25942 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD40P25942 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD40P25942 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD40P25942 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD40P25942 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CD40P25942 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.83□□□□□ -0.03
CD40P25942 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CD40P25942 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CD40P25942 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.83□□□□□ -0.03
CD40P25942 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.83□□□□□ -0.03
CD40P25942 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CD40P25942 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CD40P25942 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD40P25942 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.83□□□□□ -0.04
CD40P25942 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CD40P25942 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD40P25942 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD40P25942 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CD40P25942 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD40P25942 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD40P25942 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD40P25942 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD40P25942 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD40P25942 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CD40P25942 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.83□□□□□ -0.04
CD40P25942 GPX1P2-201ENST00000429271 606 ntBASIC14.83□□□□□ -0.04
CD40P25942 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD40P25942 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.83□□□□□ -0.04
CD40P25942 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms