Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.16■□□□□ 0.18
CHMP24386 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP24386 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP24386 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP24386 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.16■□□□□ 0.18
CHMP24386 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP24386 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.16■□□□□ 0.18
CHMP24386 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP24386 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP24386 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CHMP24386 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP24386 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CHMP24386 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.16■□□□□ 0.18
CHMP24386 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP24386 AC091304.2-201ENST00000564639 760 ntBASIC16.16■□□□□ 0.18
CHMP24386 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.16■□□□□ 0.18
CHMP24386 AL138831.2-201ENST00000606564 490 ntBASIC16.16■□□□□ 0.18
CHMP24386 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.16■□□□□ 0.18
CHMP24386 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP24386 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP24386 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.16■□□□□ 0.18
CHMP24386 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CHMP24386 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CHMP24386 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP24386 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP24386 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.16■□□□□ 0.18
CHMP24386 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP24386 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP24386 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP24386 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP24386 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP24386 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP24386 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP24386 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP24386 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP24386 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP24386 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP24386 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP24386 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CHMP24386 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.15■□□□□ 0.18
CHMP24386 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP24386 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP24386 AC004870.1-201ENST00000315132 882 ntBASIC16.15■□□□□ 0.18
CHMP24386 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP24386 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP24386 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP24386 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP24386 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP24386 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP24386 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP24386 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CHMP24386 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.15■□□□□ 0.18
CHMP24386 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.15■□□□□ 0.18
CHMP24386 AC125634.1-201ENST00000438758 1403 ntBASIC16.15■□□□□ 0.18
CHMP24386 FAAHP1-202ENST00000446499 1238 ntBASIC16.15■□□□□ 0.18
CHMP24386 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.15■□□□□ 0.18
CHMP24386 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.15■□□□□ 0.18
CHMP24386 KRT18P31-201ENST00000506277 1292 ntBASIC16.15■□□□□ 0.18
CHMP24386 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP24386 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.15■□□□□ 0.18
CHMP24386 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CHMP24386 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.15■□□□□ 0.18
CHMP24386 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.15■□□□□ 0.18
CHMP24386 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP24386 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.15■□□□□ 0.18
CHMP24386 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.15■□□□□ 0.18
CHMP24386 AC138894.3-201ENST00000603787 634 ntBASIC16.15■□□□□ 0.18
CHMP24386 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.15■□□□□ 0.18
CHMP24386 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP24386 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP24386 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.15■□□□□ 0.18
CHMP24386 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP24386 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP24386 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP24386 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.15■□□□□ 0.18
CHMP24386 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.15■□□□□ 0.18
CHMP24386 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CHMP24386 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CHMP24386 AL162727.3-201ENST00000635661 2787 ntBASIC16.15■□□□□ 0.18
CHMP24386 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.14■□□□□ 0.18
CHMP24386 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CHMP24386 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
CHMP24386 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
CHMP24386 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.14■□□□□ 0.17
CHMP24386 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.14■□□□□ 0.17
CHMP24386 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP24386 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP24386 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CHMP24386 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP24386 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
CHMP24386 AL356309.3-201ENST00000624132 1934 ntBASIC16.14■□□□□ 0.17
CHMP24386 AC016396.2-201ENST00000562575 1417 ntBASIC16.14■□□□□ 0.17
CHMP24386 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CHMP24386 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CHMP24386 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.14■□□□□ 0.17
CHMP24386 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.14■□□□□ 0.17
CHMP24386 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CHMP24386 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.14■□□□□ 0.17
CHMP24386 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.14■□□□□ 0.17
CHMP24386 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms