Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCK1P16333 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NCK1P16333 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCK1P16333 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCK1P16333 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NCK1P16333 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCK1P16333 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NCK1P16333 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NCK1P16333 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCK1P16333 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NCK1P16333 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.35■□□□□ 0.21
NCK1P16333 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
NCK1P16333 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
NCK1P16333 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.35■□□□□ 0.21
NCK1P16333 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCK1P16333 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NCK1P16333 AC010460.3-201ENST00000511359 1579 ntBASIC16.34■□□□□ 0.21
NCK1P16333 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.34■□□□□ 0.21
NCK1P16333 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
NCK1P16333 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NCK1P16333 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCK1P16333 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCK1P16333 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.34■□□□□ 0.21
NCK1P16333 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCK1P16333 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
NCK1P16333 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NCK1P16333 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
NCK1P16333 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCK1P16333 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCK1P16333 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.34■□□□□ 0.21
NCK1P16333 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.34■□□□□ 0.21
NCK1P16333 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.34■□□□□ 0.21
NCK1P16333 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCK1P16333 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NCK1P16333 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.34■□□□□ 0.21
NCK1P16333 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCK1P16333 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
NCK1P16333 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
NCK1P16333 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NCK1P16333 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.34■□□□□ 0.21
NCK1P16333 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.34■□□□□ 0.21
NCK1P16333 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCK1P16333 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NCK1P16333 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NCK1P16333 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NCK1P16333 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NCK1P16333 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NCK1P16333 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.33■□□□□ 0.2
NCK1P16333 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NCK1P16333 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.33■□□□□ 0.2
NCK1P16333 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.33■□□□□ 0.2
NCK1P16333 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.33■□□□□ 0.2
NCK1P16333 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NCK1P16333 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.33■□□□□ 0.2
NCK1P16333 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.33■□□□□ 0.2
NCK1P16333 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.33■□□□□ 0.2
NCK1P16333 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NCK1P16333 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.33■□□□□ 0.2
NCK1P16333 AL023973.1-201ENST00000624619 620 ntBASIC16.33■□□□□ 0.2
NCK1P16333 AC141257.4-201ENST00000634557 245 ntBASIC16.33■□□□□ 0.2
NCK1P16333 AC136944.6-201ENST00000634818 245 ntBASIC16.33■□□□□ 0.2
NCK1P16333 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
NCK1P16333 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NCK1P16333 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NCK1P16333 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NCK1P16333 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
NCK1P16333 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NCK1P16333 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.33■□□□□ 0.2
NCK1P16333 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NCK1P16333 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NCK1P16333 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NCK1P16333 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.33■□□□□ 0.2
NCK1P16333 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NCK1P16333 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
NCK1P16333 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
NCK1P16333 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NCK1P16333 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.33■□□□□ 0.2
NCK1P16333 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.33■□□□□ 0.2
NCK1P16333 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NCK1P16333 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NCK1P16333 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NCK1P16333 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
NCK1P16333 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.32■□□□□ 0.2
NCK1P16333 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NCK1P16333 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NCK1P16333 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NCK1P16333 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NCK1P16333 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NCK1P16333 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NCK1P16333 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NCK1P16333 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NCK1P16333 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NCK1P16333 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NCK1P16333 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.32■□□□□ 0.2
NCK1P16333 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NCK1P16333 AC096633.1-201ENST00000422446 749 ntBASIC16.32■□□□□ 0.2
NCK1P16333 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NCK1P16333 AC068472.1-201ENST00000474589 881 ntBASIC16.32■□□□□ 0.2
NCK1P16333 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.32■□□□□ 0.2
NCK1P16333 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms