Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.81■□□□□ 0.92
COL11A2P13942 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL11A2P13942 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL11A2P13942 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL11A2P13942 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.8■□□□□ 0.92
COL11A2P13942 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL11A2P13942 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC20.8■□□□□ 0.92
COL11A2P13942 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL11A2P13942 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
COL11A2P13942 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.8■□□□□ 0.92
COL11A2P13942 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL11A2P13942 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
COL11A2P13942 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC20.8■□□□□ 0.92
COL11A2P13942 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL11A2P13942 API5-211ENST00000534695 560 ntTSL 5 BASIC20.8■□□□□ 0.92
COL11A2P13942 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC20.8■□□□□ 0.92
COL11A2P13942 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL11A2P13942 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
COL11A2P13942 AC090164.3-201ENST00000610780 2143 ntBASIC20.79■□□□□ 0.92
COL11A2P13942 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL11A2P13942 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL11A2P13942 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC20.79■□□□□ 0.92
COL11A2P13942 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.79■□□□□ 0.92
COL11A2P13942 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.79■□□□□ 0.92
COL11A2P13942 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC20.79■□□□□ 0.92
COL11A2P13942 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.79■□□□□ 0.92
COL11A2P13942 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.79■□□□□ 0.92
COL11A2P13942 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC20.79■□□□□ 0.92
COL11A2P13942 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL11A2P13942 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.79■□□□□ 0.92
COL11A2P13942 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.79■□□□□ 0.92
COL11A2P13942 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.79■□□□□ 0.92
COL11A2P13942 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.79■□□□□ 0.92
COL11A2P13942 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.79■□□□□ 0.92
COL11A2P13942 TNXA-203ENST00000507684 2038 ntBASIC20.79■□□□□ 0.92
COL11A2P13942 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
COL11A2P13942 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.79■□□□□ 0.92
COL11A2P13942 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL11A2P13942 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.79■□□□□ 0.92
COL11A2P13942 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL11A2P13942 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.79■□□□□ 0.92
COL11A2P13942 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL11A2P13942 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL11A2P13942 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
COL11A2P13942 ARSEP1-201ENST00000420443 635 ntBASIC20.78■□□□□ 0.92
COL11A2P13942 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC20.78■□□□□ 0.92
COL11A2P13942 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL11A2P13942 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC20.78■□□□□ 0.92
COL11A2P13942 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC20.78■□□□□ 0.92
COL11A2P13942 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC20.78■□□□□ 0.92
COL11A2P13942 AC104794.3-201ENST00000566840 1248 ntBASIC20.78■□□□□ 0.92
COL11A2P13942 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC20.78■□□□□ 0.92
COL11A2P13942 AL359881.2-201ENST00000602973 570 ntBASIC20.78■□□□□ 0.92
COL11A2P13942 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC20.78■□□□□ 0.92
COL11A2P13942 AC018529.1-201ENST00000613063 361 ntBASIC20.78■□□□□ 0.92
COL11A2P13942 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL11A2P13942 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL11A2P13942 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.78■□□□□ 0.92
COL11A2P13942 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
COL11A2P13942 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL11A2P13942 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL11A2P13942 PRYP6-201ENST00000514804 343 ntBASIC20.78■□□□□ 0.92
COL11A2P13942 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL11A2P13942 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.78■□□□□ 0.92
COL11A2P13942 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC20.78■□□□□ 0.92
COL11A2P13942 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
COL11A2P13942 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL11A2P13942 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.77■□□□□ 0.92
COL11A2P13942 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
COL11A2P13942 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL11A2P13942 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL11A2P13942 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL11A2P13942 LINC00896-202ENST00000609602 2128 ntBASIC20.77■□□□□ 0.92
COL11A2P13942 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.77■□□□□ 0.92
COL11A2P13942 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.77■□□□□ 0.92
COL11A2P13942 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL11A2P13942 MIR1909-201ENST00000411312 80 ntBASIC20.77■□□□□ 0.92
COL11A2P13942 KRT17P7-201ENST00000451704 1104 ntBASIC20.77■□□□□ 0.92
COL11A2P13942 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL11A2P13942 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL11A2P13942 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC20.77■□□□□ 0.92
COL11A2P13942 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.77■□□□□ 0.92
COL11A2P13942 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
COL11A2P13942 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL11A2P13942 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
COL11A2P13942 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.91
COL11A2P13942 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
COL11A2P13942 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
COL11A2P13942 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL11A2P13942 AL138781.2-201ENST00000617896 1843 ntBASIC20.76■□□□□ 0.91
COL11A2P13942 FAM220BP-201ENST00000377689 816 ntBASIC20.76■□□□□ 0.91
COL11A2P13942 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC20.76■□□□□ 0.91
COL11A2P13942 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC20.76■□□□□ 0.91
COL11A2P13942 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.76■□□□□ 0.91
COL11A2P13942 CYP2A7P1-201ENST00000595391 815 ntBASIC20.76■□□□□ 0.91
COL11A2P13942 GPER1-207ENST00000619052 571 ntTSL 2 BASIC20.76■□□□□ 0.91
COL11A2P13942 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.76■□□□□ 0.91
COL11A2P13942 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL11A2P13942 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL11A2P13942 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms