Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.39■□□□□ 0.53
FAM228BP0C875 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.39■□□□□ 0.53
FAM228BP0C875 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.39■□□□□ 0.53
FAM228BP0C875 VENTXP7-201ENST00000475503 772 ntBASIC18.39■□□□□ 0.53
FAM228BP0C875 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.39■□□□□ 0.53
FAM228BP0C875 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
FAM228BP0C875 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FAM228BP0C875 AC116407.4-201ENST00000623319 1061 ntBASIC18.39■□□□□ 0.53
FAM228BP0C875 AC073592.5-201ENST00000624854 528 ntBASIC18.39■□□□□ 0.53
FAM228BP0C875 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
FAM228BP0C875 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FAM228BP0C875 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
FAM228BP0C875 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FAM228BP0C875 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.39■□□□□ 0.53
FAM228BP0C875 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FAM228BP0C875 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FAM228BP0C875 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.39■□□□□ 0.53
FAM228BP0C875 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FAM228BP0C875 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FAM228BP0C875 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
FAM228BP0C875 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
FAM228BP0C875 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FAM228BP0C875 GPR89P-201ENST00000407924 1495 ntBASIC18.39■□□□□ 0.53
FAM228BP0C875 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FAM228BP0C875 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.39■□□□□ 0.53
FAM228BP0C875 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FAM228BP0C875 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
FAM228BP0C875 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.38■□□□□ 0.53
FAM228BP0C875 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.38■□□□□ 0.53
FAM228BP0C875 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FAM228BP0C875 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.38■□□□□ 0.53
FAM228BP0C875 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.38■□□□□ 0.53
FAM228BP0C875 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.38■□□□□ 0.53
FAM228BP0C875 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FAM228BP0C875 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
FAM228BP0C875 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FAM228BP0C875 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FAM228BP0C875 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
FAM228BP0C875 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FAM228BP0C875 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FAM228BP0C875 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.38■□□□□ 0.53
FAM228BP0C875 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FAM228BP0C875 AP002383.4-201ENST00000442518 975 ntBASIC18.38■□□□□ 0.53
FAM228BP0C875 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.38■□□□□ 0.53
FAM228BP0C875 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.38■□□□□ 0.53
FAM228BP0C875 INTS4P1-201ENST00000438455 1935 ntBASIC18.38■□□□□ 0.53
FAM228BP0C875 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.38■□□□□ 0.53
FAM228BP0C875 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FAM228BP0C875 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.38■□□□□ 0.53
FAM228BP0C875 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
FAM228BP0C875 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FAM228BP0C875 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.38■□□□□ 0.53
FAM228BP0C875 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FAM228BP0C875 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.38■□□□□ 0.53
FAM228BP0C875 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.38■□□□□ 0.53
FAM228BP0C875 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FAM228BP0C875 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FAM228BP0C875 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
FAM228BP0C875 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.37■□□□□ 0.53
FAM228BP0C875 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.37■□□□□ 0.53
FAM228BP0C875 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FAM228BP0C875 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FAM228BP0C875 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
FAM228BP0C875 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
FAM228BP0C875 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FAM228BP0C875 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FAM228BP0C875 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.37■□□□□ 0.53
FAM228BP0C875 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FAM228BP0C875 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
FAM228BP0C875 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FAM228BP0C875 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
FAM228BP0C875 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.37■□□□□ 0.53
FAM228BP0C875 BNIP3P18-201ENST00000593976 575 ntBASIC18.37■□□□□ 0.53
FAM228BP0C875 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
FAM228BP0C875 KRT18P1-202ENST00000452408 1331 ntBASIC18.37■□□□□ 0.53
FAM228BP0C875 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
FAM228BP0C875 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.37■□□□□ 0.53
FAM228BP0C875 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.37■□□□□ 0.53
FAM228BP0C875 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.37■□□□□ 0.53
FAM228BP0C875 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.37■□□□□ 0.53
FAM228BP0C875 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.37■□□□□ 0.53
FAM228BP0C875 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
FAM228BP0C875 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
FAM228BP0C875 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FAM228BP0C875 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FAM228BP0C875 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.36■□□□□ 0.53
FAM228BP0C875 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
FAM228BP0C875 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FAM228BP0C875 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FAM228BP0C875 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FAM228BP0C875 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FAM228BP0C875 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FAM228BP0C875 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.36■□□□□ 0.53
FAM228BP0C875 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
FAM228BP0C875 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FAM228BP0C875 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.36■□□□□ 0.53
FAM228BP0C875 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FAM228BP0C875 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.36■□□□□ 0.53
FAM228BP0C875 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
FAM228BP0C875 DRAXINP1-201ENST00000437611 948 ntBASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms