Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 AL031133.1-201ENST00000406807 723 ntBASIC18.68■□□□□ 0.58
CCDC172P0C7W6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 AL845331.1-201ENST00000424978 1190 ntBASIC18.68■□□□□ 0.58
CCDC172P0C7W6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 STK25P1-201ENST00000585406 838 ntBASIC18.68■□□□□ 0.58
CCDC172P0C7W6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC172P0C7W6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 AL353593.2-201ENST00000602529 1483 ntBASIC18.67■□□□□ 0.58
CCDC172P0C7W6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC172P0C7W6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 KRT8P10-201ENST00000450021 1447 ntBASIC18.66■□□□□ 0.58
CCDC172P0C7W6 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms