Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM1P09493 AL603756.1-201ENST00000606511 2163 ntBASIC19.06■□□□□ 0.64
TPM1P09493 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
TPM1P09493 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM1P09493 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM1P09493 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM1P09493 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.05■□□□□ 0.64
TPM1P09493 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.05■□□□□ 0.64
TPM1P09493 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM1P09493 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM1P09493 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM1P09493 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM1P09493 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM1P09493 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM1P09493 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM1P09493 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM1P09493 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.05■□□□□ 0.64
TPM1P09493 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM1P09493 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
TPM1P09493 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM1P09493 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM1P09493 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.05■□□□□ 0.64
TPM1P09493 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM1P09493 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TPM1P09493 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TPM1P09493 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TPM1P09493 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.05■□□□□ 0.64
TPM1P09493 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
TPM1P09493 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.05■□□□□ 0.64
TPM1P09493 AC140113.3-201ENST00000605663 199 ntBASIC19.05■□□□□ 0.64
TPM1P09493 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM1P09493 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.05■□□□□ 0.64
TPM1P09493 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM1P09493 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.05■□□□□ 0.64
TPM1P09493 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TPM1P09493 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM1P09493 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TPM1P09493 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM1P09493 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.05■□□□□ 0.64
TPM1P09493 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM1P09493 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.05■□□□□ 0.64
TPM1P09493 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.04■□□□□ 0.64
TPM1P09493 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC19.04■□□□□ 0.64
TPM1P09493 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TPM1P09493 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.04■□□□□ 0.64
TPM1P09493 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.04■□□□□ 0.64
TPM1P09493 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TPM1P09493 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
TPM1P09493 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TPM1P09493 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TPM1P09493 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TPM1P09493 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.04■□□□□ 0.64
TPM1P09493 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TPM1P09493 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.04■□□□□ 0.64
TPM1P09493 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.04■□□□□ 0.64
TPM1P09493 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.04■□□□□ 0.64
TPM1P09493 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.04■□□□□ 0.64
TPM1P09493 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
TPM1P09493 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.04■□□□□ 0.64
TPM1P09493 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.04■□□□□ 0.64
TPM1P09493 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.04■□□□□ 0.64
TPM1P09493 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
TPM1P09493 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.04■□□□□ 0.64
TPM1P09493 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TPM1P09493 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
TPM1P09493 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.04■□□□□ 0.64
TPM1P09493 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TPM1P09493 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TPM1P09493 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
TPM1P09493 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TPM1P09493 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
TPM1P09493 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
TPM1P09493 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TPM1P09493 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.03■□□□□ 0.64
TPM1P09493 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TPM1P09493 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TPM1P09493 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.03■□□□□ 0.64
TPM1P09493 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TPM1P09493 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TPM1P09493 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TPM1P09493 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TPM1P09493 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TPM1P09493 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TPM1P09493 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TPM1P09493 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.03■□□□□ 0.64
TPM1P09493 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TPM1P09493 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TPM1P09493 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.03■□□□□ 0.64
TPM1P09493 AC096633.1-201ENST00000422446 749 ntBASIC19.03■□□□□ 0.64
TPM1P09493 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.03■□□□□ 0.64
TPM1P09493 MTCL1P1-201ENST00000446207 792 ntBASIC19.03■□□□□ 0.64
TPM1P09493 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TPM1P09493 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.03■□□□□ 0.64
TPM1P09493 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TPM1P09493 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TPM1P09493 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TPM1P09493 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TPM1P09493 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TPM1P09493 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TPM1P09493 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms