Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CAPN1P07384 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.02■□□□□ 0.32
CAPN1P07384 AP000347.1-202ENST00000435868 847 ntBASIC17.02■□□□□ 0.32
CAPN1P07384 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.02■□□□□ 0.32
CAPN1P07384 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.02■□□□□ 0.32
CAPN1P07384 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CAPN1P07384 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CAPN1P07384 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CAPN1P07384 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CAPN1P07384 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.02■□□□□ 0.31
CAPN1P07384 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.02■□□□□ 0.31
CAPN1P07384 AL121761.2-201ENST00000598007 1648 ntBASIC17.02■□□□□ 0.31
CAPN1P07384 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CAPN1P07384 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CAPN1P07384 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
CAPN1P07384 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
CAPN1P07384 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN1P07384 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN1P07384 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.01■□□□□ 0.31
CAPN1P07384 AC097374.2-201ENST00000618617 1306 ntBASIC17.01■□□□□ 0.31
CAPN1P07384 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN1P07384 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN1P07384 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CAPN1P07384 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN1P07384 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CAPN1P07384 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN1P07384 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN1P07384 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN1P07384 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN1P07384 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN1P07384 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.01■□□□□ 0.31
CAPN1P07384 MRPL3P1-201ENST00000400109 1033 ntBASIC17.01■□□□□ 0.31
CAPN1P07384 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.01■□□□□ 0.31
CAPN1P07384 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.01■□□□□ 0.31
CAPN1P07384 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.01■□□□□ 0.31
CAPN1P07384 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.01■□□□□ 0.31
CAPN1P07384 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.01■□□□□ 0.31
CAPN1P07384 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.01■□□□□ 0.31
CAPN1P07384 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CAPN1P07384 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.01■□□□□ 0.31
CAPN1P07384 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.01■□□□□ 0.31
CAPN1P07384 AL139327.4-201ENST00000612362 153 ntBASIC17.01■□□□□ 0.31
CAPN1P07384 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.01■□□□□ 0.31
CAPN1P07384 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN1P07384 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.01■□□□□ 0.31
CAPN1P07384 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN1P07384 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.01■□□□□ 0.31
CAPN1P07384 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN1P07384 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN1P07384 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN1P07384 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN1P07384 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CAPN1P07384 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN1P07384 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN1P07384 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17■□□□□ 0.31
CAPN1P07384 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CAPN1P07384 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN1P07384 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN1P07384 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN1P07384 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
CAPN1P07384 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CAPN1P07384 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17■□□□□ 0.31
CAPN1P07384 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17■□□□□ 0.31
CAPN1P07384 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN1P07384 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17■□□□□ 0.31
CAPN1P07384 COX5BP2-201ENST00000392354 334 ntBASIC17■□□□□ 0.31
CAPN1P07384 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CAPN1P07384 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN1P07384 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17■□□□□ 0.31
CAPN1P07384 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17■□□□□ 0.31
CAPN1P07384 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17■□□□□ 0.31
CAPN1P07384 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17■□□□□ 0.31
CAPN1P07384 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17■□□□□ 0.31
CAPN1P07384 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17■□□□□ 0.31
CAPN1P07384 AL591684.3-201ENST00000605187 298 ntBASIC17■□□□□ 0.31
CAPN1P07384 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17■□□□□ 0.31
CAPN1P07384 AC114341.1-201ENST00000618070 349 ntBASIC17■□□□□ 0.31
CAPN1P07384 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17■□□□□ 0.31
CAPN1P07384 NKILA-202ENST00000614771 2598 ntBASIC17■□□□□ 0.31
CAPN1P07384 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN1P07384 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17■□□□□ 0.31
CAPN1P07384 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CAPN1P07384 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN1P07384 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CAPN1P07384 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN1P07384 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17■□□□□ 0.31
CAPN1P07384 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CAPN1P07384 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN1P07384 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.99■□□□□ 0.31
CAPN1P07384 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN1P07384 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN1P07384 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.99■□□□□ 0.31
CAPN1P07384 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CAPN1P07384 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN1P07384 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN1P07384 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN1P07384 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN1P07384 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
CAPN1P07384 AC011676.5-201ENST00000624864 2660 ntBASIC16.99■□□□□ 0.31
CAPN1P07384 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms