Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CDK4-206ENST00000549606 558 ntTSL 2 BASIC22.39■■□□□ 1.17
COL5A2P05997 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC22.39■■□□□ 1.17
COL5A2P05997 TEX28P1-201ENST00000613479 1221 ntBASIC22.39■■□□□ 1.17
COL5A2P05997 TEX28P2-201ENST00000617764 1221 ntBASIC22.39■■□□□ 1.17
COL5A2P05997 AC004840.1-201ENST00000636359 365 ntBASIC22.39■■□□□ 1.17
COL5A2P05997 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL5A2P05997 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC22.39■■□□□ 1.17
COL5A2P05997 EGFEM1P-202ENST00000431685 1563 ntBASIC22.39■■□□□ 1.17
COL5A2P05997 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC22.39■■□□□ 1.17
COL5A2P05997 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
COL5A2P05997 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC22.38■■□□□ 1.17
COL5A2P05997 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC22.38■■□□□ 1.17
COL5A2P05997 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC22.38■■□□□ 1.17
COL5A2P05997 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC22.38■■□□□ 1.17
COL5A2P05997 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL5A2P05997 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL5A2P05997 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
COL5A2P05997 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL5A2P05997 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL5A2P05997 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
COL5A2P05997 AL138781.2-201ENST00000617896 1843 ntBASIC22.38■■□□□ 1.17
COL5A2P05997 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL5A2P05997 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC22.38■■□□□ 1.17
COL5A2P05997 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC22.38■■□□□ 1.17
COL5A2P05997 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC22.38■■□□□ 1.17
COL5A2P05997 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC22.38■■□□□ 1.17
COL5A2P05997 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL5A2P05997 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC22.38■■□□□ 1.17
COL5A2P05997 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL5A2P05997 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL5A2P05997 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL5A2P05997 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL5A2P05997 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC22.38■■□□□ 1.17
COL5A2P05997 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL5A2P05997 SLC25A24-204ENST00000569674 2357 ntBASIC22.38■■□□□ 1.17
COL5A2P05997 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL5A2P05997 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
COL5A2P05997 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
COL5A2P05997 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC22.37■■□□□ 1.17
COL5A2P05997 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL5A2P05997 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL5A2P05997 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC22.37■■□□□ 1.17
COL5A2P05997 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC22.37■■□□□ 1.17
COL5A2P05997 API5-211ENST00000534695 560 ntTSL 5 BASIC22.37■■□□□ 1.17
COL5A2P05997 AC009407.1-201ENST00000568958 598 ntBASIC22.37■■□□□ 1.17
COL5A2P05997 TP53TG3HP-202ENST00000569755 579 ntBASIC22.37■■□□□ 1.17
COL5A2P05997 AC140912.1-201ENST00000577171 1054 ntBASIC22.37■■□□□ 1.17
COL5A2P05997 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC22.37■■□□□ 1.17
COL5A2P05997 IGHV3-72-202ENST00000621503 303 ntBASIC22.37■■□□□ 1.17
COL5A2P05997 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
COL5A2P05997 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
COL5A2P05997 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL5A2P05997 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC22.37■■□□□ 1.17
COL5A2P05997 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
COL5A2P05997 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
COL5A2P05997 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC22.37■■□□□ 1.17
COL5A2P05997 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC22.36■■□□□ 1.17
COL5A2P05997 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC22.36■■□□□ 1.17
COL5A2P05997 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL5A2P05997 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL5A2P05997 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL5A2P05997 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC22.36■■□□□ 1.17
COL5A2P05997 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL5A2P05997 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
COL5A2P05997 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
COL5A2P05997 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
COL5A2P05997 IGHV3-71-201ENST00000523324 359 ntBASIC22.36■■□□□ 1.17
COL5A2P05997 SSH2-210ENST00000582084 560 ntTSL 3 BASIC22.36■■□□□ 1.17
COL5A2P05997 AC131009.4-201ENST00000624048 1740 ntBASIC22.36■■□□□ 1.17
COL5A2P05997 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL5A2P05997 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL5A2P05997 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
COL5A2P05997 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL5A2P05997 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
COL5A2P05997 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL5A2P05997 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC22.36■■□□□ 1.17
COL5A2P05997 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC22.36■■□□□ 1.17
COL5A2P05997 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
COL5A2P05997 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
COL5A2P05997 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC22.35■■□□□ 1.17
COL5A2P05997 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC22.35■■□□□ 1.17
COL5A2P05997 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL5A2P05997 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC22.35■■□□□ 1.17
COL5A2P05997 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC22.35■■□□□ 1.17
COL5A2P05997 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC22.35■■□□□ 1.17
COL5A2P05997 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
COL5A2P05997 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC22.35■■□□□ 1.17
COL5A2P05997 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC22.35■■□□□ 1.17
COL5A2P05997 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC22.35■■□□□ 1.17
COL5A2P05997 AC090164.3-201ENST00000610780 2143 ntBASIC22.35■■□□□ 1.17
COL5A2P05997 AC003101.2-201ENST00000612557 442 ntBASIC22.35■■□□□ 1.17
COL5A2P05997 AC004790.1-201ENST00000612686 536 ntBASIC22.35■■□□□ 1.17
COL5A2P05997 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
COL5A2P05997 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC22.35■■□□□ 1.17
COL5A2P05997 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL5A2P05997 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
COL5A2P05997 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
COL5A2P05997 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL5A2P05997 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL5A2P05997 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms