Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.55□□□□□ -0.24
TOMM40O96008 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TOMM40O96008 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TOMM40O96008 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TOMM40O96008 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TOMM40O96008 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TOMM40O96008 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TOMM40O96008 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.55□□□□□ -0.24
TOMM40O96008 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TOMM40O96008 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TOMM40O96008 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TOMM40O96008 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TOMM40O96008 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TOMM40O96008 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TOMM40O96008 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TOMM40O96008 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TOMM40O96008 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TOMM40O96008 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TOMM40O96008 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.55□□□□□ -0.24
TOMM40O96008 AC007967.3-201ENST00000434308 558 ntBASIC13.55□□□□□ -0.24
TOMM40O96008 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.55□□□□□ -0.24
TOMM40O96008 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.55□□□□□ -0.24
TOMM40O96008 LINC01238-205ENST00000567549 1107 ntBASIC13.55□□□□□ -0.24
TOMM40O96008 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.55□□□□□ -0.24
TOMM40O96008 AC083849.1-201ENST00000615227 514 ntBASIC13.55□□□□□ -0.24
TOMM40O96008 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.55□□□□□ -0.24
TOMM40O96008 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TOMM40O96008 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TOMM40O96008 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TOMM40O96008 AL662844.4-201ENST00000606367 2838 ntBASIC13.55□□□□□ -0.24
TOMM40O96008 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.55□□□□□ -0.24
TOMM40O96008 AC106886.4-201ENST00000623557 2502 ntBASIC13.55□□□□□ -0.24
TOMM40O96008 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TOMM40O96008 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.55□□□□□ -0.24
TOMM40O96008 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
TOMM40O96008 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TOMM40O96008 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TOMM40O96008 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TOMM40O96008 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TOMM40O96008 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.55□□□□□ -0.24
TOMM40O96008 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TOMM40O96008 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TOMM40O96008 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.55□□□□□ -0.24
TOMM40O96008 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.55□□□□□ -0.24
TOMM40O96008 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TOMM40O96008 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TOMM40O96008 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TOMM40O96008 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TOMM40O96008 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TOMM40O96008 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TOMM40O96008 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TOMM40O96008 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TOMM40O96008 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
TOMM40O96008 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.54□□□□□ -0.24
TOMM40O96008 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TOMM40O96008 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.54□□□□□ -0.24
TOMM40O96008 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TOMM40O96008 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TOMM40O96008 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TOMM40O96008 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
TOMM40O96008 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TOMM40O96008 LINC02012-201ENST00000608206 1725 ntBASIC13.54□□□□□ -0.24
TOMM40O96008 AC093525.9-201ENST00000624961 1746 ntBASIC13.54□□□□□ -0.24
TOMM40O96008 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TOMM40O96008 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TOMM40O96008 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TOMM40O96008 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TOMM40O96008 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TOMM40O96008 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TOMM40O96008 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.54□□□□□ -0.24
TOMM40O96008 AL645929.1-201ENST00000420084 975 ntBASIC13.54□□□□□ -0.24
TOMM40O96008 SPDYE13P-201ENST00000445314 798 ntBASIC13.54□□□□□ -0.24
TOMM40O96008 AC063952.2-201ENST00000498792 1227 ntBASIC13.54□□□□□ -0.24
TOMM40O96008 AC109462.3-201ENST00000573934 613 ntBASIC13.54□□□□□ -0.24
TOMM40O96008 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
TOMM40O96008 AC019129.2-201ENST00000609837 1235 ntBASIC13.54□□□□□ -0.24
TOMM40O96008 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.54□□□□□ -0.24
TOMM40O96008 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TOMM40O96008 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TOMM40O96008 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TOMM40O96008 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TOMM40O96008 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TOMM40O96008 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TOMM40O96008 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TOMM40O96008 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.54□□□□□ -0.24
TOMM40O96008 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TOMM40O96008 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TOMM40O96008 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TOMM40O96008 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
TOMM40O96008 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TOMM40O96008 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TOMM40O96008 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TOMM40O96008 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TOMM40O96008 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TOMM40O96008 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TOMM40O96008 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.53□□□□□ -0.24
TOMM40O96008 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TOMM40O96008 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.53□□□□□ -0.24
TOMM40O96008 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TOMM40O96008 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms