Protein–RNA interactions for Protein: O95447

LCA5L, Lebercilin-like protein, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5LO95447 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCA5LO95447 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
LCA5LO95447 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCA5LO95447 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.31■□□□□ 0.52
LCA5LO95447 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
LCA5LO95447 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCA5LO95447 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCA5LO95447 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.31■□□□□ 0.52
LCA5LO95447 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.31■□□□□ 0.52
LCA5LO95447 AC091607.1-201ENST00000490318 1060 ntBASIC18.31■□□□□ 0.52
LCA5LO95447 KRT8P26-201ENST00000534154 1276 ntBASIC18.31■□□□□ 0.52
LCA5LO95447 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.31■□□□□ 0.52
LCA5LO95447 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.31■□□□□ 0.52
LCA5LO95447 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.31■□□□□ 0.52
LCA5LO95447 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LCA5LO95447 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.31■□□□□ 0.52
LCA5LO95447 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCA5LO95447 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.31■□□□□ 0.52
LCA5LO95447 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCA5LO95447 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.31■□□□□ 0.52
LCA5LO95447 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCA5LO95447 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCA5LO95447 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCA5LO95447 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCA5LO95447 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LCA5LO95447 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.31■□□□□ 0.52
LCA5LO95447 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCA5LO95447 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.3■□□□□ 0.52
LCA5LO95447 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LCA5LO95447 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LCA5LO95447 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.3■□□□□ 0.52
LCA5LO95447 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCA5LO95447 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LCA5LO95447 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
LCA5LO95447 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCA5LO95447 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.3■□□□□ 0.52
LCA5LO95447 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LCA5LO95447 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCA5LO95447 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
LCA5LO95447 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCA5LO95447 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LCA5LO95447 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCA5LO95447 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.3■□□□□ 0.52
LCA5LO95447 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.3■□□□□ 0.52
LCA5LO95447 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
LCA5LO95447 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.3■□□□□ 0.52
LCA5LO95447 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.3■□□□□ 0.52
LCA5LO95447 AC022616.7-201ENST00000525383 220 ntBASIC18.3■□□□□ 0.52
LCA5LO95447 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.3■□□□□ 0.52
LCA5LO95447 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.3■□□□□ 0.52
LCA5LO95447 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.3■□□□□ 0.52
LCA5LO95447 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.3■□□□□ 0.52
LCA5LO95447 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
LCA5LO95447 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCA5LO95447 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.3■□□□□ 0.52
LCA5LO95447 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
LCA5LO95447 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LCA5LO95447 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.3■□□□□ 0.52
LCA5LO95447 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCA5LO95447 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LCA5LO95447 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCA5LO95447 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.3■□□□□ 0.52
LCA5LO95447 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.3■□□□□ 0.52
LCA5LO95447 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCA5LO95447 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCA5LO95447 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCA5LO95447 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.3■□□□□ 0.52
LCA5LO95447 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LCA5LO95447 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LCA5LO95447 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.29■□□□□ 0.52
LCA5LO95447 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.29■□□□□ 0.52
LCA5LO95447 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.29■□□□□ 0.52
LCA5LO95447 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LCA5LO95447 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
LCA5LO95447 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LCA5LO95447 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
LCA5LO95447 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LCA5LO95447 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LCA5LO95447 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LCA5LO95447 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.29■□□□□ 0.52
LCA5LO95447 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.29■□□□□ 0.52
LCA5LO95447 AL136038.3-201ENST00000561909 1096 ntBASIC18.29■□□□□ 0.52
LCA5LO95447 AP005901.3-202ENST00000581653 237 ntBASIC18.29■□□□□ 0.52
LCA5LO95447 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.29■□□□□ 0.52
LCA5LO95447 AC073592.5-201ENST00000624854 528 ntBASIC18.29■□□□□ 0.52
LCA5LO95447 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LCA5LO95447 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LCA5LO95447 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LCA5LO95447 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.29■□□□□ 0.52
LCA5LO95447 AL162727.3-201ENST00000635661 2787 ntBASIC18.29■□□□□ 0.52
LCA5LO95447 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.29■□□□□ 0.52
LCA5LO95447 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LCA5LO95447 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCA5LO95447 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCA5LO95447 AC022188.1-201ENST00000620960 1664 ntBASIC18.28■□□□□ 0.52
LCA5LO95447 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCA5LO95447 AL662844.4-201ENST00000606367 2838 ntBASIC18.28■□□□□ 0.52
LCA5LO95447 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.28■□□□□ 0.52
LCA5LO95447 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.28■□□□□ 0.52
LCA5LO95447 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms