Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BEST1O76090 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BEST1O76090 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BEST1O76090 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.05■□□□□ 0.48
BEST1O76090 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
BEST1O76090 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
BEST1O76090 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BEST1O76090 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BEST1O76090 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.04■□□□□ 0.48
BEST1O76090 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
BEST1O76090 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
BEST1O76090 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
BEST1O76090 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BEST1O76090 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.04■□□□□ 0.48
BEST1O76090 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.04■□□□□ 0.48
BEST1O76090 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.04■□□□□ 0.48
BEST1O76090 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.04■□□□□ 0.48
BEST1O76090 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.04■□□□□ 0.48
BEST1O76090 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.04■□□□□ 0.48
BEST1O76090 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BEST1O76090 AC010654.1-201ENST00000615722 808 ntBASIC18.04■□□□□ 0.48
BEST1O76090 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
BEST1O76090 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
BEST1O76090 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BEST1O76090 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BEST1O76090 LETM1P2-201ENST00000597330 2178 ntBASIC18.04■□□□□ 0.48
BEST1O76090 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.04■□□□□ 0.48
BEST1O76090 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
BEST1O76090 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
BEST1O76090 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
BEST1O76090 LINC02012-201ENST00000608206 1725 ntBASIC18.03■□□□□ 0.48
BEST1O76090 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BEST1O76090 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
BEST1O76090 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
BEST1O76090 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
BEST1O76090 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
BEST1O76090 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
BEST1O76090 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BEST1O76090 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BEST1O76090 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BEST1O76090 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BEST1O76090 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.03■□□□□ 0.48
BEST1O76090 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.03■□□□□ 0.48
BEST1O76090 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BEST1O76090 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.03■□□□□ 0.48
BEST1O76090 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BEST1O76090 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.03■□□□□ 0.48
BEST1O76090 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
BEST1O76090 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
BEST1O76090 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
BEST1O76090 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.03■□□□□ 0.48
BEST1O76090 AL591424.1-201ENST00000442569 1213 ntBASIC18.03■□□□□ 0.48
BEST1O76090 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.03■□□□□ 0.48
BEST1O76090 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.03■□□□□ 0.48
BEST1O76090 AC018845.2-201ENST00000568326 409 ntBASIC18.03■□□□□ 0.48
BEST1O76090 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.03■□□□□ 0.48
BEST1O76090 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
BEST1O76090 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BEST1O76090 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BEST1O76090 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
BEST1O76090 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.03■□□□□ 0.48
BEST1O76090 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
BEST1O76090 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
BEST1O76090 AC002310.6-201ENST00000624451 1377 ntBASIC18.03■□□□□ 0.48
BEST1O76090 FRMD8P1-201ENST00000440433 1524 ntBASIC18.03■□□□□ 0.48
BEST1O76090 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BEST1O76090 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
BEST1O76090 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
BEST1O76090 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
BEST1O76090 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.02■□□□□ 0.48
BEST1O76090 PMS2P7-201ENST00000506558 1336 ntBASIC18.02■□□□□ 0.48
BEST1O76090 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
BEST1O76090 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
BEST1O76090 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
BEST1O76090 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
BEST1O76090 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BEST1O76090 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BEST1O76090 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
BEST1O76090 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
BEST1O76090 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.02■□□□□ 0.48
BEST1O76090 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
BEST1O76090 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BEST1O76090 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.02■□□□□ 0.48
BEST1O76090 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
BEST1O76090 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
BEST1O76090 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
BEST1O76090 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
BEST1O76090 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.02■□□□□ 0.48
BEST1O76090 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
BEST1O76090 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.02■□□□□ 0.48
BEST1O76090 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
BEST1O76090 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
BEST1O76090 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BEST1O76090 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BEST1O76090 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BEST1O76090 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
BEST1O76090 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.02■□□□□ 0.47
BEST1O76090 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BEST1O76090 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BEST1O76090 AC012313.1-201ENST00000593393 3059 ntBASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms