Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLPXO76031 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.72■□□□□ 0.11
CLPXO76031 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.72■□□□□ 0.11
CLPXO76031 NUDT16P1-203ENST00000513809 620 ntBASIC15.72■□□□□ 0.11
CLPXO76031 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLPXO76031 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.72■□□□□ 0.11
CLPXO76031 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.72■□□□□ 0.11
CLPXO76031 MIR6786-201ENST00000616843 113 ntBASIC15.72■□□□□ 0.11
CLPXO76031 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLPXO76031 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.72■□□□□ 0.11
CLPXO76031 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLPXO76031 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLPXO76031 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CLPXO76031 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.72■□□□□ 0.11
CLPXO76031 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.72■□□□□ 0.11
CLPXO76031 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CLPXO76031 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLPXO76031 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLPXO76031 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLPXO76031 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLPXO76031 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CLPXO76031 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLPXO76031 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLPXO76031 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLPXO76031 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.72■□□□□ 0.11
CLPXO76031 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLPXO76031 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLPXO76031 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLPXO76031 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLPXO76031 FSCN1P1-201ENST00000568912 1481 ntBASIC15.71■□□□□ 0.11
CLPXO76031 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLPXO76031 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLPXO76031 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.71■□□□□ 0.11
CLPXO76031 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.71■□□□□ 0.11
CLPXO76031 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLPXO76031 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLPXO76031 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.71■□□□□ 0.11
CLPXO76031 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.71■□□□□ 0.11
CLPXO76031 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLPXO76031 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLPXO76031 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLPXO76031 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLPXO76031 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLPXO76031 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLPXO76031 MMP23A-201ENST00000234610 1017 ntBASIC15.71■□□□□ 0.11
CLPXO76031 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CLPXO76031 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.71■□□□□ 0.11
CLPXO76031 RCN1P1-201ENST00000400413 996 ntBASIC15.71■□□□□ 0.11
CLPXO76031 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.71■□□□□ 0.11
CLPXO76031 B3GAT3P1-201ENST00000471720 806 ntBASIC15.71■□□□□ 0.11
CLPXO76031 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CLPXO76031 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.71■□□□□ 0.11
CLPXO76031 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.71■□□□□ 0.11
CLPXO76031 AC092364.2-201ENST00000596710 2692 ntBASIC15.71■□□□□ 0.11
CLPXO76031 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLPXO76031 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CLPXO76031 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLPXO76031 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLPXO76031 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CLPXO76031 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLPXO76031 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CLPXO76031 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.71■□□□□ 0.1
CLPXO76031 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CLPXO76031 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
CLPXO76031 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLPXO76031 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLPXO76031 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.7■□□□□ 0.1
CLPXO76031 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CLPXO76031 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLPXO76031 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLPXO76031 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CLPXO76031 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLPXO76031 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLPXO76031 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLPXO76031 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CLPXO76031 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CLPXO76031 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLPXO76031 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLPXO76031 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
CLPXO76031 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
CLPXO76031 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.7■□□□□ 0.1
CLPXO76031 MIR149-201ENST00000384879 89 ntBASIC15.7■□□□□ 0.1
CLPXO76031 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.7■□□□□ 0.1
CLPXO76031 FAM207BP-201ENST00000447172 505 ntBASIC15.7■□□□□ 0.1
CLPXO76031 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLPXO76031 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.7■□□□□ 0.1
CLPXO76031 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.7■□□□□ 0.1
CLPXO76031 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLPXO76031 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.7■□□□□ 0.1
CLPXO76031 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CLPXO76031 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLPXO76031 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLPXO76031 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CLPXO76031 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.7■□□□□ 0.1
CLPXO76031 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLPXO76031 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLPXO76031 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CLPXO76031 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLPXO76031 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CLPXO76031 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms