Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A1O14983 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.68■□□□□ 0.74
ATP2A1O14983 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.68■□□□□ 0.74
ATP2A1O14983 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.68■□□□□ 0.74
ATP2A1O14983 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.68■□□□□ 0.74
ATP2A1O14983 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.68■□□□□ 0.74
ATP2A1O14983 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A1O14983 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A1O14983 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ATP2A1O14983 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A1O14983 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A1O14983 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.68■□□□□ 0.74
ATP2A1O14983 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
ATP2A1O14983 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A1O14983 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.68■□□□□ 0.74
ATP2A1O14983 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.68■□□□□ 0.74
ATP2A1O14983 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A1O14983 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A1O14983 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.68■□□□□ 0.74
ATP2A1O14983 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ATP2A1O14983 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A1O14983 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP2A1O14983 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
ATP2A1O14983 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ATP2A1O14983 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP2A1O14983 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.67■□□□□ 0.74
ATP2A1O14983 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATP2A1O14983 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.67■□□□□ 0.74
ATP2A1O14983 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP2A1O14983 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP2A1O14983 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATP2A1O14983 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP2A1O14983 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATP2A1O14983 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.67■□□□□ 0.74
ATP2A1O14983 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.67■□□□□ 0.74
ATP2A1O14983 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.67■□□□□ 0.74
ATP2A1O14983 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.67■□□□□ 0.74
ATP2A1O14983 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP2A1O14983 AC105339.1-204ENST00000636249 355 ntBASIC19.67■□□□□ 0.74
ATP2A1O14983 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP2A1O14983 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.67■□□□□ 0.74
ATP2A1O14983 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP2A1O14983 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ATP2A1O14983 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.67■□□□□ 0.74
ATP2A1O14983 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP2A1O14983 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP2A1O14983 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ATP2A1O14983 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
ATP2A1O14983 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
ATP2A1O14983 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ATP2A1O14983 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
ATP2A1O14983 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.66■□□□□ 0.74
ATP2A1O14983 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP2A1O14983 AC092919.2-201ENST00000623631 1645 ntBASIC19.66■□□□□ 0.74
ATP2A1O14983 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP2A1O14983 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.66■□□□□ 0.74
ATP2A1O14983 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
ATP2A1O14983 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.66■□□□□ 0.74
ATP2A1O14983 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP2A1O14983 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP2A1O14983 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.66■□□□□ 0.74
ATP2A1O14983 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ATP2A1O14983 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP2A1O14983 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.66■□□□□ 0.74
ATP2A1O14983 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ATP2A1O14983 ADH5P3-201ENST00000433842 1137 ntBASIC19.66■□□□□ 0.74
ATP2A1O14983 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.66■□□□□ 0.74
ATP2A1O14983 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATP2A1O14983 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ATP2A1O14983 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.66■□□□□ 0.74
ATP2A1O14983 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.66■□□□□ 0.74
ATP2A1O14983 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATP2A1O14983 AL645728.2-201ENST00000641974 660 ntBASIC19.66■□□□□ 0.74
ATP2A1O14983 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.66■□□□□ 0.74
ATP2A1O14983 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP2A1O14983 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP2A1O14983 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ATP2A1O14983 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
ATP2A1O14983 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
ATP2A1O14983 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
ATP2A1O14983 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.66■□□□□ 0.74
ATP2A1O14983 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATP2A1O14983 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATP2A1O14983 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.66■□□□□ 0.74
ATP2A1O14983 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ATP2A1O14983 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2A1O14983 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2A1O14983 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2A1O14983 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.65■□□□□ 0.74
ATP2A1O14983 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
ATP2A1O14983 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2A1O14983 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ATP2A1O14983 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2A1O14983 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2A1O14983 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.65■□□□□ 0.74
ATP2A1O14983 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ATP2A1O14983 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.65■□□□□ 0.74
ATP2A1O14983 AC112191.1-201ENST00000523689 701 ntBASIC19.65■□□□□ 0.74
ATP2A1O14983 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ATP2A1O14983 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms