Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CUX2O14529 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC29.1■■■□□ 2.25
CUX2O14529 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
CUX2O14529 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
CUX2O14529 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
CUX2O14529 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
CUX2O14529 RASL12-203ENST00000434605 982 ntTSL 2 BASIC29.1■■■□□ 2.25
CUX2O14529 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC29.1■■■□□ 2.25
CUX2O14529 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC29.1■■■□□ 2.25
CUX2O14529 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
CUX2O14529 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
CUX2O14529 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC29.09■■■□□ 2.25
CUX2O14529 FLYWCH1P1-201ENST00000460917 1874 ntBASIC29.09■■■□□ 2.25
CUX2O14529 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC29.09■■■□□ 2.25
CUX2O14529 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CUX2O14529 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CUX2O14529 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CUX2O14529 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC29.09■■■□□ 2.25
CUX2O14529 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC29.09■■■□□ 2.25
CUX2O14529 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC29.09■■■□□ 2.25
CUX2O14529 FADS2-212ENST00000522639 360 ntTSL 5 BASIC29.09■■■□□ 2.25
CUX2O14529 FADS2-215ENST00000574708 385 ntTSL 3 BASIC29.09■■■□□ 2.25
CUX2O14529 NKG7-205ENST00000600427 520 ntTSL 3 BASIC29.09■■■□□ 2.25
CUX2O14529 RPS24-214ENST00000613865 538 ntTSL 5 BASIC29.09■■■□□ 2.25
CUX2O14529 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CUX2O14529 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC29.09■■■□□ 2.25
CUX2O14529 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CUX2O14529 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CUX2O14529 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CUX2O14529 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC29.08■■■□□ 2.25
CUX2O14529 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CUX2O14529 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CUX2O14529 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CUX2O14529 SPDYE19P-201ENST00000338590 713 ntBASIC29.08■■■□□ 2.25
CUX2O14529 AC015936.2-201ENST00000593177 259 ntBASIC29.08■■■□□ 2.25
CUX2O14529 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC29.08■■■□□ 2.25
CUX2O14529 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CUX2O14529 BX276092.7-203ENST00000637198 1536 ntBASIC29.07■■■□□ 2.24
CUX2O14529 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CUX2O14529 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CUX2O14529 CROCCP3-202ENST00000420820 1947 ntBASIC29.07■■■□□ 2.24
CUX2O14529 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
CUX2O14529 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
CUX2O14529 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC29.07■■■□□ 2.24
CUX2O14529 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC29.07■■■□□ 2.24
CUX2O14529 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
CUX2O14529 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CUX2O14529 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
CUX2O14529 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
CUX2O14529 AC002558.1-201ENST00000488906 803 ntBASIC29.07■■■□□ 2.24
CUX2O14529 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC29.07■■■□□ 2.24
CUX2O14529 RNA5SP412-201ENST00000516234 123 ntBASIC29.07■■■□□ 2.24
CUX2O14529 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC29.07■■■□□ 2.24
CUX2O14529 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC29.07■■■□□ 2.24
CUX2O14529 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC29.07■■■□□ 2.24
CUX2O14529 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC29.07■■■□□ 2.24
CUX2O14529 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC29.07■■■□□ 2.24
CUX2O14529 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC29.07■■■□□ 2.24
CUX2O14529 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
CUX2O14529 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC29.07■■■□□ 2.24
CUX2O14529 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
CUX2O14529 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CUX2O14529 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC29.06■■■□□ 2.24
CUX2O14529 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CUX2O14529 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CUX2O14529 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC29.06■■■□□ 2.24
CUX2O14529 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CUX2O14529 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CUX2O14529 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC29.06■■■□□ 2.24
CUX2O14529 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC29.06■■■□□ 2.24
CUX2O14529 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC29.06■■■□□ 2.24
CUX2O14529 AC253536.4-201ENST00000440539 267 ntBASIC29.06■■■□□ 2.24
CUX2O14529 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC29.06■■■□□ 2.24
CUX2O14529 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC29.06■■■□□ 2.24
CUX2O14529 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CUX2O14529 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CUX2O14529 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
CUX2O14529 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CUX2O14529 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CUX2O14529 AL035456.1-201ENST00000456064 1369 ntBASIC29.06■■■□□ 2.24
CUX2O14529 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC29.05■■■□□ 2.24
CUX2O14529 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CUX2O14529 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC29.05■■■□□ 2.24
CUX2O14529 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
CUX2O14529 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC29.05■■■□□ 2.24
CUX2O14529 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
CUX2O14529 DOC2GP-202ENST00000514950 1163 ntBASIC29.05■■■□□ 2.24
CUX2O14529 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC29.05■■■□□ 2.24
CUX2O14529 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC29.05■■■□□ 2.24
CUX2O14529 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
CUX2O14529 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CUX2O14529 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC29.05■■■□□ 2.24
CUX2O14529 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CUX2O14529 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC29.04■■■□□ 2.24
CUX2O14529 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC29.04■■■□□ 2.24
CUX2O14529 ELK1P1-201ENST00000485699 580 ntBASIC29.04■■■□□ 2.24
CUX2O14529 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC29.04■■■□□ 2.24
CUX2O14529 AC243960.2-201ENST00000600996 747 ntBASIC29.04■■■□□ 2.24
CUX2O14529 AC015967.2-201ENST00000624092 234 ntBASIC29.04■■■□□ 2.24
CUX2O14529 AC006435.4-201ENST00000625037 234 ntBASIC29.04■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms