Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.84■□□□□ 0.29
E2F3O00716 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
E2F3O00716 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.84■□□□□ 0.29
E2F3O00716 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.84■□□□□ 0.29
E2F3O00716 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.84■□□□□ 0.29
E2F3O00716 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
E2F3O00716 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
E2F3O00716 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
E2F3O00716 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
E2F3O00716 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
E2F3O00716 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
E2F3O00716 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
E2F3O00716 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
E2F3O00716 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
E2F3O00716 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
E2F3O00716 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
E2F3O00716 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
E2F3O00716 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.83■□□□□ 0.28
E2F3O00716 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
E2F3O00716 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.83■□□□□ 0.28
E2F3O00716 KLF4P1-201ENST00000412782 1185 ntBASIC16.83■□□□□ 0.28
E2F3O00716 NSUN5P1-202ENST00000421140 1535 ntBASIC16.83■□□□□ 0.28
E2F3O00716 IGHV3-47-201ENST00000425060 335 ntBASIC16.83■□□□□ 0.28
E2F3O00716 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
E2F3O00716 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.83■□□□□ 0.28
E2F3O00716 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.83■□□□□ 0.28
E2F3O00716 NSUN5P2-203ENST00000457352 1529 ntBASIC16.83■□□□□ 0.28
E2F3O00716 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
E2F3O00716 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
E2F3O00716 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
E2F3O00716 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.83■□□□□ 0.28
E2F3O00716 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
E2F3O00716 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.83■□□□□ 0.28
E2F3O00716 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
E2F3O00716 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
E2F3O00716 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
E2F3O00716 AC092068.3-201ENST00000587894 2016 ntBASIC16.83■□□□□ 0.28
E2F3O00716 AL121772.3-201ENST00000610840 674 ntBASIC16.83■□□□□ 0.28
E2F3O00716 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.83■□□□□ 0.28
E2F3O00716 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
E2F3O00716 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.83■□□□□ 0.28
E2F3O00716 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.83■□□□□ 0.28
E2F3O00716 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
E2F3O00716 AC073592.5-201ENST00000624854 528 ntBASIC16.83■□□□□ 0.28
E2F3O00716 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.83■□□□□ 0.28
E2F3O00716 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
E2F3O00716 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
E2F3O00716 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
E2F3O00716 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
E2F3O00716 FLJ38576-201ENST00000623820 2459 ntBASIC16.82■□□□□ 0.28
E2F3O00716 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
E2F3O00716 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
E2F3O00716 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
E2F3O00716 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.82■□□□□ 0.28
E2F3O00716 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
E2F3O00716 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
E2F3O00716 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
E2F3O00716 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
E2F3O00716 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
E2F3O00716 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
E2F3O00716 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
E2F3O00716 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
E2F3O00716 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
E2F3O00716 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
E2F3O00716 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
E2F3O00716 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
E2F3O00716 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.82■□□□□ 0.28
E2F3O00716 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
E2F3O00716 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.82■□□□□ 0.28
E2F3O00716 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
E2F3O00716 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.82■□□□□ 0.28
E2F3O00716 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.82■□□□□ 0.28
E2F3O00716 MINOS1P3-201ENST00000457048 203 ntBASIC16.82■□□□□ 0.28
E2F3O00716 AC096582.2-201ENST00000510860 516 ntBASIC16.82■□□□□ 0.28
E2F3O00716 AL160237.2-201ENST00000556165 472 ntBASIC16.82■□□□□ 0.28
E2F3O00716 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.82■□□□□ 0.28
E2F3O00716 AC091304.2-201ENST00000564639 760 ntBASIC16.82■□□□□ 0.28
E2F3O00716 AC012615.1-201ENST00000565797 1299 ntBASIC16.82■□□□□ 0.28
E2F3O00716 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
E2F3O00716 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.82■□□□□ 0.28
E2F3O00716 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
E2F3O00716 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
E2F3O00716 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
E2F3O00716 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.82■□□□□ 0.28
E2F3O00716 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
E2F3O00716 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
E2F3O00716 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
E2F3O00716 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.82■□□□□ 0.28
E2F3O00716 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
E2F3O00716 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.82■□□□□ 0.28
E2F3O00716 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.82■□□□□ 0.28
E2F3O00716 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
E2F3O00716 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
E2F3O00716 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
E2F3O00716 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
E2F3O00716 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
E2F3O00716 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
E2F3O00716 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
E2F3O00716 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
E2F3O00716 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms