Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRIT2A6NDA9 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.39■□□□□ 0.21
LRIT2A6NDA9 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRIT2A6NDA9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.39■□□□□ 0.21
LRIT2A6NDA9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRIT2A6NDA9 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRIT2A6NDA9 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.39■□□□□ 0.21
LRIT2A6NDA9 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRIT2A6NDA9 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LRIT2A6NDA9 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 AC018712.1-201ENST00000455767 687 ntBASIC16.38■□□□□ 0.21
LRIT2A6NDA9 AF186996.4-201ENST00000467186 377 ntBASIC16.38■□□□□ 0.21
LRIT2A6NDA9 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 AP002469.2-201ENST00000531724 424 ntBASIC16.38■□□□□ 0.21
LRIT2A6NDA9 AL160237.2-201ENST00000556165 472 ntBASIC16.38■□□□□ 0.21
LRIT2A6NDA9 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT2A6NDA9 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 AC060834.1-201ENST00000443027 2032 ntBASIC16.37■□□□□ 0.21
LRIT2A6NDA9 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 KRT18P67-201ENST00000432816 1264 ntBASIC16.37■□□□□ 0.21
LRIT2A6NDA9 HNRNPDP1-201ENST00000439535 754 ntBASIC16.37■□□□□ 0.21
LRIT2A6NDA9 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 OR7E14P-202ENST00000530490 1290 ntBASIC16.37■□□□□ 0.21
LRIT2A6NDA9 AC124947.2-201ENST00000547118 1133 ntBASIC16.37■□□□□ 0.21
LRIT2A6NDA9 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
LRIT2A6NDA9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms