Protein–RNA interactions for Protein: A2RUT3

TMEM89, Transmembrane protein 89, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM89A2RUT3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.66□□□□□ -0.22
TMEM89A2RUT3 AL627223.1-201ENST00000416693 442 ntBASIC13.66□□□□□ -0.22
TMEM89A2RUT3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM89A2RUT3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.66□□□□□ -0.22
TMEM89A2RUT3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.66□□□□□ -0.22
TMEM89A2RUT3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.66□□□□□ -0.22
TMEM89A2RUT3 TERF1P3-201ENST00000505638 1227 ntBASIC13.66□□□□□ -0.22
TMEM89A2RUT3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.66□□□□□ -0.22
TMEM89A2RUT3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.66□□□□□ -0.22
TMEM89A2RUT3 DUX4L27-201ENST00000554796 1261 ntBASIC13.66□□□□□ -0.22
TMEM89A2RUT3 AC005225.4-201ENST00000557330 545 ntBASIC13.66□□□□□ -0.22
TMEM89A2RUT3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.66□□□□□ -0.22
TMEM89A2RUT3 AL139327.4-201ENST00000612362 153 ntBASIC13.66□□□□□ -0.22
TMEM89A2RUT3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM89A2RUT3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM89A2RUT3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM89A2RUT3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM89A2RUT3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC13.66□□□□□ -0.22
TMEM89A2RUT3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM89A2RUT3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM89A2RUT3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM89A2RUT3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TMEM89A2RUT3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM89A2RUT3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC13.66□□□□□ -0.22
TMEM89A2RUT3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM89A2RUT3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM89A2RUT3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM89A2RUT3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM89A2RUT3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM89A2RUT3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM89A2RUT3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 LINC00304-203ENST00000565008 1864 ntBASIC13.65□□□□□ -0.22
TMEM89A2RUT3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 LINC00982-205ENST00000420957 435 ntBASIC13.65□□□□□ -0.22
TMEM89A2RUT3 CNN2P2-201ENST00000443536 909 ntBASIC13.65□□□□□ -0.22
TMEM89A2RUT3 FAM185BP-201ENST00000443595 716 ntBASIC13.65□□□□□ -0.22
TMEM89A2RUT3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 CNN2P3-201ENST00000450201 906 ntBASIC13.65□□□□□ -0.22
TMEM89A2RUT3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 FAM86C2P-203ENST00000528684 1004 ntBASIC13.65□□□□□ -0.22
TMEM89A2RUT3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.65□□□□□ -0.22
TMEM89A2RUT3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 AC012645.4-201ENST00000610691 1061 ntBASIC13.65□□□□□ -0.22
TMEM89A2RUT3 AC026120.1-201ENST00000611536 926 ntBASIC13.65□□□□□ -0.22
TMEM89A2RUT3 AL136317.3-201ENST00000618497 906 ntBASIC13.65□□□□□ -0.22
TMEM89A2RUT3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 AC009336.1-201ENST00000608941 1553 ntBASIC13.65□□□□□ -0.22
TMEM89A2RUT3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM89A2RUT3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC13.64□□□□□ -0.23
TMEM89A2RUT3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM89A2RUT3 PI4KAP1-204ENST00000612579 1703 ntBASIC13.64□□□□□ -0.23
TMEM89A2RUT3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM89A2RUT3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM89A2RUT3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TMEM89A2RUT3 REXO1L11P-201ENST00000620964 1927 ntBASIC13.64□□□□□ -0.23
TMEM89A2RUT3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM89A2RUT3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM89A2RUT3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM89A2RUT3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM89A2RUT3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM89A2RUT3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM89A2RUT3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM89A2RUT3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM89A2RUT3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM89A2RUT3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC13.64□□□□□ -0.23
TMEM89A2RUT3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms