Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 AC011840.4-201ENST00000578471 627 ntBASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 AC006449.5-201ENST00000610658 2098 ntBASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 AC022616.7-201ENST00000525383 220 ntBASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 AC011498.5-201ENST00000592027 486 ntBASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 IGHV3-41-201ENST00000613121 348 ntBASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 AC132938.5-201ENST00000624980 1813 ntBASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.37■□□□□ 0.37
TCRBV9S1A1TA0A576 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 STK19B-204ENST00000512515 211 ntBASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 PCDHB17P-201ENST00000539533 2393 ntBASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV9S1A1TA0A576 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms