Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 AC005332.1-201ENST00000577698 1310 ntBASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 TP73-AS1-210ENST00000637775 1455 ntBASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA3Q9Y5H8 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 KLF4P1-201ENST00000412782 1185 ntBASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 FAM86EP-206ENST00000510506 987 ntBASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 AC073592.5-201ENST00000624854 528 ntBASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA3Q9Y5H8 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHA3Q9Y5H8 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHA3Q9Y5H8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHA3Q9Y5H8 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHA3Q9Y5H8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHA3Q9Y5H8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHA3Q9Y5H8 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHA3Q9Y5H8 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PCDHA3Q9Y5H8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHA3Q9Y5H8 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
PCDHA3Q9Y5H8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHA3Q9Y5H8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHA3Q9Y5H8 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.48
PCDHA3Q9Y5H8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHA3Q9Y5H8 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.02■□□□□ 0.48
PCDHA3Q9Y5H8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
PCDHA3Q9Y5H8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHA3Q9Y5H8 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.02■□□□□ 0.48
PCDHA3Q9Y5H8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHA3Q9Y5H8 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHA3Q9Y5H8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.02■□□□□ 0.47
PCDHA3Q9Y5H8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHA3Q9Y5H8 AC233702.3-201ENST00000578656 1387 ntBASIC18.02■□□□□ 0.47
PCDHA3Q9Y5H8 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHA3Q9Y5H8 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHA3Q9Y5H8 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
PCDHA3Q9Y5H8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHA3Q9Y5H8 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHA3Q9Y5H8 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
PCDHA3Q9Y5H8 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHA3Q9Y5H8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHA3Q9Y5H8 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHA3Q9Y5H8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
PCDHA3Q9Y5H8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHA3Q9Y5H8 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHA3Q9Y5H8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.01■□□□□ 0.47
PCDHA3Q9Y5H8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHA3Q9Y5H8 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHA3Q9Y5H8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHA3Q9Y5H8 AC092171.3-201ENST00000610122 2651 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms