Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGC4Q9Y5F7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGC4Q9Y5F7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGC4Q9Y5F7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PCDHGC4Q9Y5F7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PCDHGC4Q9Y5F7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHGC4Q9Y5F7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 AC105339.3-201ENST00000560043 636 ntBASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PCDHGC4Q9Y5F7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 PKD1P1-201ENST00000458669 6805 ntBASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 AC073621.1-201ENST00000392730 636 ntBASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 KRT18P27-201ENST00000427733 1299 ntBASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 AC092910.1-201ENST00000482027 1129 ntBASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 AC093909.1-201ENST00000504731 1122 ntBASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 AC116407.3-201ENST00000623905 1129 ntBASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 AL590787.1-201ENST00000568856 1315 ntBASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGC4Q9Y5F7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 AC243591.1-201ENST00000452967 1364 ntBASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 ELK2BP-201ENST00000415014 1224 ntBASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms