Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB1Q9Y5F3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB1Q9Y5F3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB1Q9Y5F3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHB1Q9Y5F3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB1Q9Y5F3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PCDHB1Q9Y5F3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB1Q9Y5F3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB1Q9Y5F3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB1Q9Y5F3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB1Q9Y5F3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB1Q9Y5F3 AC116353.5-201ENST00000638148 1699 ntBASIC17.27■□□□□ 0.36
PCDHB1Q9Y5F3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHB1Q9Y5F3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB1Q9Y5F3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB1Q9Y5F3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.27■□□□□ 0.36
PCDHB1Q9Y5F3 KLF4P1-201ENST00000412782 1185 ntBASIC17.27■□□□□ 0.36
PCDHB1Q9Y5F3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHB1Q9Y5F3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHB1Q9Y5F3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.27■□□□□ 0.36
PCDHB1Q9Y5F3 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.27■□□□□ 0.36
PCDHB1Q9Y5F3 STK19B-204ENST00000512515 211 ntBASIC17.27■□□□□ 0.36
PCDHB1Q9Y5F3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHB1Q9Y5F3 FAM197Y3-203ENST00000618346 717 ntBASIC17.27■□□□□ 0.36
PCDHB1Q9Y5F3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.27■□□□□ 0.36
PCDHB1Q9Y5F3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PCDHB1Q9Y5F3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB1Q9Y5F3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB1Q9Y5F3 AC009336.1-201ENST00000608941 1553 ntBASIC17.27■□□□□ 0.35
PCDHB1Q9Y5F3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
PCDHB1Q9Y5F3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
PCDHB1Q9Y5F3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
PCDHB1Q9Y5F3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 UPF3AP3-201ENST00000420996 769 ntBASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 ABCD1P5-201ENST00000445663 754 ntBASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 OR7E14P-202ENST00000530490 1290 ntBASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 AL139424.1-201ENST00000607572 797 ntBASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 AC073592.5-201ENST00000624854 528 ntBASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PCDHB1Q9Y5F3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 HMGN1P19-201ENST00000436976 333 ntBASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 AC025062.2-201ENST00000605477 670 ntBASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 Z83851.2-201ENST00000609564 659 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms