Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 AC024909.3-201ENST00000611513 2257 ntBASIC16.37■□□□□ 0.21
AP4S1Q9Y587 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 AC104771.1-201ENST00000603335 964 ntBASIC16.37■□□□□ 0.21
AP4S1Q9Y587 CD177P1-201ENST00000606252 935 ntBASIC16.37■□□□□ 0.21
AP4S1Q9Y587 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.37■□□□□ 0.21
AP4S1Q9Y587 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 ESRRAP1-201ENST00000400596 1257 ntBASIC16.36■□□□□ 0.21
AP4S1Q9Y587 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 SEC1P-202ENST00000473944 940 ntBASIC16.36■□□□□ 0.21
AP4S1Q9Y587 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 AC068587.6-202ENST00000641839 5619 ntBASIC16.36■□□□□ 0.21
AP4S1Q9Y587 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4S1Q9Y587 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 AC092850.2-201ENST00000623821 2697 ntBASIC16.35■□□□□ 0.21
AP4S1Q9Y587 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 AC005052.1-201ENST00000625181 2492 ntBASIC16.35■□□□□ 0.21
AP4S1Q9Y587 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 AL365203.3-201ENST00000609742 2057 ntBASIC16.35■□□□□ 0.21
AP4S1Q9Y587 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 SLC25A1P2-201ENST00000430693 912 ntBASIC16.35■□□□□ 0.21
AP4S1Q9Y587 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.35■□□□□ 0.21
AP4S1Q9Y587 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 AC073648.6-201ENST00000641589 218 ntBASIC16.35■□□□□ 0.21
AP4S1Q9Y587 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms