Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00588Q9Y4M8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00588Q9Y4M8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00588Q9Y4M8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
LINC00588Q9Y4M8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00588Q9Y4M8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00588Q9Y4M8 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00588Q9Y4M8 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
LINC00588Q9Y4M8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00588Q9Y4M8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00588Q9Y4M8 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00588Q9Y4M8 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00588Q9Y4M8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00588Q9Y4M8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00588Q9Y4M8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC00588Q9Y4M8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00588Q9Y4M8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00588Q9Y4M8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00588Q9Y4M8 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 HNRNPA1P28-201ENST00000424481 961 ntBASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 DNAJB3-201ENST00000446806 729 ntBASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 AC010327.4-202ENST00000591484 748 ntBASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
LINC00588Q9Y4M8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 GNAS-203ENST00000306120 1878 ntBASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 IGLL3P-201ENST00000412472 434 ntBASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 UPF3AP3-201ENST00000420996 769 ntBASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 AC004832.2-201ENST00000426397 482 ntBASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 MIR3687-2-201ENST00000577708 61 ntBASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 MIR3687-1-201ENST00000614492 61 ntBASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms