Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 DUX4L17-201ENST00000557360 1267 ntBASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 AL031432.2-201ENST00000566714 459 ntBASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 AL928711.1-201ENST00000570165 459 ntBASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 FZD10-202ENST00000539839 3282 ntBASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
HPS5Q9UPZ3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HPS5Q9UPZ3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HPS5Q9UPZ3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.52■□□□□ 0.88
HPS5Q9UPZ3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HPS5Q9UPZ3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
HPS5Q9UPZ3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.52■□□□□ 0.88
HPS5Q9UPZ3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HPS5Q9UPZ3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HPS5Q9UPZ3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HPS5Q9UPZ3 AL353593.2-201ENST00000602529 1483 ntBASIC20.52■□□□□ 0.88
HPS5Q9UPZ3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HPS5Q9UPZ3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HPS5Q9UPZ3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
HPS5Q9UPZ3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
HPS5Q9UPZ3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HPS5Q9UPZ3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.52■□□□□ 0.88
HPS5Q9UPZ3 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.52■□□□□ 0.88
HPS5Q9UPZ3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC20.52■□□□□ 0.88
HPS5Q9UPZ3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.52■□□□□ 0.88
HPS5Q9UPZ3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC20.52■□□□□ 0.88
HPS5Q9UPZ3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.52■□□□□ 0.88
HPS5Q9UPZ3 AC018845.2-201ENST00000568326 409 ntBASIC20.52■□□□□ 0.88
HPS5Q9UPZ3 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.52■□□□□ 0.88
HPS5Q9UPZ3 AD001527.2-201ENST00000622994 785 ntBASIC20.52■□□□□ 0.88
HPS5Q9UPZ3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
HPS5Q9UPZ3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HPS5Q9UPZ3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
HPS5Q9UPZ3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.52■□□□□ 0.87
HPS5Q9UPZ3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
HPS5Q9UPZ3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.52■□□□□ 0.87
HPS5Q9UPZ3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.52■□□□□ 0.87
HPS5Q9UPZ3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HPS5Q9UPZ3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HPS5Q9UPZ3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HPS5Q9UPZ3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HPS5Q9UPZ3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
HPS5Q9UPZ3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HPS5Q9UPZ3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HPS5Q9UPZ3 AC073621.1-201ENST00000392730 636 ntBASIC20.51■□□□□ 0.87
HPS5Q9UPZ3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.51■□□□□ 0.87
HPS5Q9UPZ3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.51■□□□□ 0.87
HPS5Q9UPZ3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.51■□□□□ 0.87
HPS5Q9UPZ3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HPS5Q9UPZ3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.51■□□□□ 0.87
HPS5Q9UPZ3 AC005225.4-201ENST00000557330 545 ntBASIC20.51■□□□□ 0.87
HPS5Q9UPZ3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HPS5Q9UPZ3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.51■□□□□ 0.87
HPS5Q9UPZ3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HPS5Q9UPZ3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HPS5Q9UPZ3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HPS5Q9UPZ3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.51■□□□□ 0.87
HPS5Q9UPZ3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
HPS5Q9UPZ3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.51■□□□□ 0.87
HPS5Q9UPZ3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
HPS5Q9UPZ3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HPS5Q9UPZ3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HPS5Q9UPZ3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HPS5Q9UPZ3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.5■□□□□ 0.87
HPS5Q9UPZ3 GPR89P-201ENST00000407924 1495 ntBASIC20.5■□□□□ 0.87
HPS5Q9UPZ3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
HPS5Q9UPZ3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HPS5Q9UPZ3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HPS5Q9UPZ3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
HPS5Q9UPZ3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
HPS5Q9UPZ3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.5■□□□□ 0.87
HPS5Q9UPZ3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.5■□□□□ 0.87
HPS5Q9UPZ3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HPS5Q9UPZ3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.5■□□□□ 0.87
HPS5Q9UPZ3 AC103564.2-201ENST00000432853 1299 ntBASIC20.5■□□□□ 0.87
HPS5Q9UPZ3 CCDC74BP1-201ENST00000508880 1123 ntBASIC20.5■□□□□ 0.87
HPS5Q9UPZ3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HPS5Q9UPZ3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.5■□□□□ 0.87
HPS5Q9UPZ3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.5■□□□□ 0.87
HPS5Q9UPZ3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
HPS5Q9UPZ3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
HPS5Q9UPZ3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
HPS5Q9UPZ3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HPS5Q9UPZ3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.5■□□□□ 0.87
HPS5Q9UPZ3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HPS5Q9UPZ3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms