Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 AC079602.3-201ENST00000623931 403 ntBASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 AC133561.5-201ENST00000635547 218 ntBASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 AC079328.2-201ENST00000561241 3354 ntBASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 AP003733.1-201ENST00000491725 852 ntBASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 AC011558.1-201ENST00000623459 338 ntBASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 BX276092.7-203ENST00000637198 1536 ntBASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB4Q9UN71 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 AC113347.1-201ENST00000413321 391 ntBASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 HLA-F-220ENST00000434407 884 ntBASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGB4Q9UN71 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms