Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 AD000864.1-201ENST00000624076 2295 ntBASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 AC090340.1-201ENST00000620778 4980 ntBASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 DUX4L17-201ENST00000557360 1267 ntBASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 AC092068.3-201ENST00000587894 2016 ntBASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 AC004870.1-201ENST00000315132 882 ntBASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 FAAHP1-202ENST00000446499 1238 ntBASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 AC018712.1-201ENST00000455767 687 ntBASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 AC073648.2-201ENST00000510116 352 ntBASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 AC138932.1-201ENST00000534164 6830 ntBASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC3Q9UN70 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 AC079781.3-201ENST00000449110 356 ntBASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 FAM197Y8-203ENST00000450145 560 ntBASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 AC120057.1-201ENST00000483947 663 ntBASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 RNPS1P1-201ENST00000507437 918 ntBASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 AC006557.2-201ENST00000592985 1240 ntBASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PCDHGC3Q9UN70 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms