Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DENND2AQ9ULE3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DENND2AQ9ULE3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DENND2AQ9ULE3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
DENND2AQ9ULE3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.83■□□□□ 0.93
DENND2AQ9ULE3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DENND2AQ9ULE3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DENND2AQ9ULE3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
DENND2AQ9ULE3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
DENND2AQ9ULE3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DENND2AQ9ULE3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DENND2AQ9ULE3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DENND2AQ9ULE3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.83■□□□□ 0.93
DENND2AQ9ULE3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DENND2AQ9ULE3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
DENND2AQ9ULE3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.83■□□□□ 0.93
DENND2AQ9ULE3 ALG1L5P-201ENST00000482043 771 ntBASIC20.83■□□□□ 0.93
DENND2AQ9ULE3 YBX1P5-201ENST00000509441 847 ntBASIC20.83■□□□□ 0.93
DENND2AQ9ULE3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.83■□□□□ 0.93
DENND2AQ9ULE3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.83■□□□□ 0.93
DENND2AQ9ULE3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.83■□□□□ 0.93
DENND2AQ9ULE3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DENND2AQ9ULE3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.83■□□□□ 0.93
DENND2AQ9ULE3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.83■□□□□ 0.93
DENND2AQ9ULE3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
DENND2AQ9ULE3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
DENND2AQ9ULE3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DENND2AQ9ULE3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
DENND2AQ9ULE3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
DENND2AQ9ULE3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
DENND2AQ9ULE3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
DENND2AQ9ULE3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
DENND2AQ9ULE3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DENND2AQ9ULE3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.83■□□□□ 0.92
DENND2AQ9ULE3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
DENND2AQ9ULE3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.92
DENND2AQ9ULE3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DENND2AQ9ULE3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.82■□□□□ 0.92
DENND2AQ9ULE3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
DENND2AQ9ULE3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
DENND2AQ9ULE3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DENND2AQ9ULE3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DENND2AQ9ULE3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.82■□□□□ 0.92
DENND2AQ9ULE3 AC211486.1-202ENST00000416371 468 ntBASIC20.82■□□□□ 0.92
DENND2AQ9ULE3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.82■□□□□ 0.92
DENND2AQ9ULE3 AC211476.1-201ENST00000503899 468 ntBASIC20.82■□□□□ 0.92
DENND2AQ9ULE3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.82■□□□□ 0.92
DENND2AQ9ULE3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DENND2AQ9ULE3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
DENND2AQ9ULE3 AC079781.4-201ENST00000641908 219 ntBASIC20.82■□□□□ 0.92
DENND2AQ9ULE3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
DENND2AQ9ULE3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
DENND2AQ9ULE3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DENND2AQ9ULE3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DENND2AQ9ULE3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DENND2AQ9ULE3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.81■□□□□ 0.92
DENND2AQ9ULE3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.81■□□□□ 0.92
DENND2AQ9ULE3 AC129492.6-201ENST00000611383 1305 ntBASIC20.81■□□□□ 0.92
DENND2AQ9ULE3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DENND2AQ9ULE3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DENND2AQ9ULE3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.81■□□□□ 0.92
DENND2AQ9ULE3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DENND2AQ9ULE3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
DENND2AQ9ULE3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DENND2AQ9ULE3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DENND2AQ9ULE3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DENND2AQ9ULE3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.81■□□□□ 0.92
DENND2AQ9ULE3 MKNK2P1-201ENST00000437526 628 ntBASIC20.81■□□□□ 0.92
DENND2AQ9ULE3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.81■□□□□ 0.92
DENND2AQ9ULE3 AC074386.1-202ENST00000463561 864 ntBASIC20.81■□□□□ 0.92
DENND2AQ9ULE3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.81■□□□□ 0.92
DENND2AQ9ULE3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
DENND2AQ9ULE3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.81■□□□□ 0.92
DENND2AQ9ULE3 AP001160.2-201ENST00000596071 487 ntBASIC20.81■□□□□ 0.92
DENND2AQ9ULE3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DENND2AQ9ULE3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DENND2AQ9ULE3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DENND2AQ9ULE3 LINC00896-202ENST00000609602 2128 ntBASIC20.81■□□□□ 0.92
DENND2AQ9ULE3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DENND2AQ9ULE3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DENND2AQ9ULE3 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms