Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CXXC1Q9P0U4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 IGHV3-71-201ENST00000523324 359 ntBASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXXC1Q9P0U4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.33■□□□□ 0.53
CXXC1Q9P0U4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CXXC1Q9P0U4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CXXC1Q9P0U4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CXXC1Q9P0U4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.33■□□□□ 0.53
CXXC1Q9P0U4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CXXC1Q9P0U4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CXXC1Q9P0U4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CXXC1Q9P0U4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CXXC1Q9P0U4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.33■□□□□ 0.53
CXXC1Q9P0U4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.33■□□□□ 0.52
CXXC1Q9P0U4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CXXC1Q9P0U4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.33■□□□□ 0.52
CXXC1Q9P0U4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CXXC1Q9P0U4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.33■□□□□ 0.52
CXXC1Q9P0U4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.33■□□□□ 0.52
CXXC1Q9P0U4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.33■□□□□ 0.52
CXXC1Q9P0U4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.33■□□□□ 0.52
CXXC1Q9P0U4 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.33■□□□□ 0.52
CXXC1Q9P0U4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CXXC1Q9P0U4 HILS1-202ENST00000545329 423 ntBASIC18.33■□□□□ 0.52
CXXC1Q9P0U4 AL138918.1-201ENST00000568306 659 ntBASIC18.33■□□□□ 0.52
CXXC1Q9P0U4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.33■□□□□ 0.52
CXXC1Q9P0U4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CXXC1Q9P0U4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.33■□□□□ 0.52
CXXC1Q9P0U4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CXXC1Q9P0U4 AL138828.2-201ENST00000615812 383 ntBASIC18.33■□□□□ 0.52
CXXC1Q9P0U4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
CXXC1Q9P0U4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CXXC1Q9P0U4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CXXC1Q9P0U4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.33■□□□□ 0.52
CXXC1Q9P0U4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CXXC1Q9P0U4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.33■□□□□ 0.52
CXXC1Q9P0U4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CXXC1Q9P0U4 KRT18P55-202ENST00000578578 1546 ntBASIC18.33■□□□□ 0.52
CXXC1Q9P0U4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXXC1Q9P0U4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.32■□□□□ 0.52
CXXC1Q9P0U4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CXXC1Q9P0U4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CXXC1Q9P0U4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXXC1Q9P0U4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.32■□□□□ 0.52
CXXC1Q9P0U4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CXXC1Q9P0U4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.32■□□□□ 0.52
CXXC1Q9P0U4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXXC1Q9P0U4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
CXXC1Q9P0U4 WIZP1-201ENST00000531444 2299 ntBASIC18.32■□□□□ 0.52
CXXC1Q9P0U4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.32■□□□□ 0.52
CXXC1Q9P0U4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
CXXC1Q9P0U4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.32■□□□□ 0.52
CXXC1Q9P0U4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXXC1Q9P0U4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.32■□□□□ 0.52
CXXC1Q9P0U4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CXXC1Q9P0U4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.32■□□□□ 0.52
CXXC1Q9P0U4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.32■□□□□ 0.52
CXXC1Q9P0U4 AC010336.2-201ENST00000564226 506 ntBASIC18.32■□□□□ 0.52
CXXC1Q9P0U4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXXC1Q9P0U4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.32■□□□□ 0.52
CXXC1Q9P0U4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.32■□□□□ 0.52
CXXC1Q9P0U4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.32■□□□□ 0.52
CXXC1Q9P0U4 AC084346.2-201ENST00000607097 949 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms