Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.19■□□□□ 0.18
CNIH4Q9P003 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
CNIH4Q9P003 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CNIH4Q9P003 MTDHP3-201ENST00000594186 672 ntBASIC16.19■□□□□ 0.18
CNIH4Q9P003 AC104692.2-201ENST00000603054 253 ntBASIC16.19■□□□□ 0.18
CNIH4Q9P003 AC064862.7-201ENST00000604520 867 ntBASIC16.19■□□□□ 0.18
CNIH4Q9P003 AP001269.4-201ENST00000609611 512 ntBASIC16.19■□□□□ 0.18
CNIH4Q9P003 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.19■□□□□ 0.18
CNIH4Q9P003 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.19■□□□□ 0.18
CNIH4Q9P003 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CNIH4Q9P003 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.19■□□□□ 0.18
CNIH4Q9P003 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNIH4Q9P003 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CNIH4Q9P003 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CNIH4Q9P003 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CNIH4Q9P003 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNIH4Q9P003 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.18■□□□□ 0.18
CNIH4Q9P003 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH4Q9P003 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH4Q9P003 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH4Q9P003 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH4Q9P003 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.18■□□□□ 0.18
CNIH4Q9P003 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH4Q9P003 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH4Q9P003 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH4Q9P003 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH4Q9P003 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH4Q9P003 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH4Q9P003 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH4Q9P003 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH4Q9P003 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.18■□□□□ 0.18
CNIH4Q9P003 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.18■□□□□ 0.18
CNIH4Q9P003 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.18■□□□□ 0.18
CNIH4Q9P003 AC079781.3-201ENST00000449110 356 ntBASIC16.18■□□□□ 0.18
CNIH4Q9P003 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.18■□□□□ 0.18
CNIH4Q9P003 LINC01451-201ENST00000623792 534 ntBASIC16.18■□□□□ 0.18
CNIH4Q9P003 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.18■□□□□ 0.18
CNIH4Q9P003 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.18■□□□□ 0.18
CNIH4Q9P003 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH4Q9P003 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.18■□□□□ 0.18
CNIH4Q9P003 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH4Q9P003 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH4Q9P003 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH4Q9P003 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH4Q9P003 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH4Q9P003 KRT8P10-201ENST00000450021 1447 ntBASIC16.18■□□□□ 0.18
CNIH4Q9P003 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH4Q9P003 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH4Q9P003 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CNIH4Q9P003 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH4Q9P003 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.18■□□□□ 0.18
CNIH4Q9P003 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH4Q9P003 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.18■□□□□ 0.18
CNIH4Q9P003 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH4Q9P003 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CNIH4Q9P003 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CNIH4Q9P003 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CNIH4Q9P003 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH4Q9P003 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.17■□□□□ 0.18
CNIH4Q9P003 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.17■□□□□ 0.18
CNIH4Q9P003 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH4Q9P003 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH4Q9P003 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CNIH4Q9P003 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH4Q9P003 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.17■□□□□ 0.18
CNIH4Q9P003 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.17■□□□□ 0.18
CNIH4Q9P003 AL662844.1-201ENST00000546340 181 ntBASIC16.17■□□□□ 0.18
CNIH4Q9P003 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.17■□□□□ 0.18
CNIH4Q9P003 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.17■□□□□ 0.18
CNIH4Q9P003 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH4Q9P003 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.17■□□□□ 0.18
CNIH4Q9P003 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH4Q9P003 AP000867.4-201ENST00000641616 219 ntBASIC16.17■□□□□ 0.18
CNIH4Q9P003 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.17■□□□□ 0.18
CNIH4Q9P003 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CNIH4Q9P003 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH4Q9P003 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH4Q9P003 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CNIH4Q9P003 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH4Q9P003 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
CNIH4Q9P003 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH4Q9P003 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH4Q9P003 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CNIH4Q9P003 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.17■□□□□ 0.18
CNIH4Q9P003 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CNIH4Q9P003 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH4Q9P003 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.16■□□□□ 0.18
CNIH4Q9P003 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CNIH4Q9P003 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNIH4Q9P003 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CNIH4Q9P003 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.16■□□□□ 0.18
CNIH4Q9P003 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNIH4Q9P003 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNIH4Q9P003 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNIH4Q9P003 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNIH4Q9P003 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CNIH4Q9P003 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNIH4Q9P003 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNIH4Q9P003 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.16■□□□□ 0.18
CNIH4Q9P003 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms