Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.69■□□□□ 0.42
ATP13A1Q9HD20 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP13A1Q9HD20 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP13A1Q9HD20 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
ATP13A1Q9HD20 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP13A1Q9HD20 AL353135.1-201ENST00000606729 504 ntBASIC17.69■□□□□ 0.42
ATP13A1Q9HD20 AC120114.3-201ENST00000611923 658 ntBASIC17.69■□□□□ 0.42
ATP13A1Q9HD20 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
ATP13A1Q9HD20 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP13A1Q9HD20 AC016396.2-201ENST00000562575 1417 ntBASIC17.69■□□□□ 0.42
ATP13A1Q9HD20 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP13A1Q9HD20 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP13A1Q9HD20 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP13A1Q9HD20 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP13A1Q9HD20 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP13A1Q9HD20 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP13A1Q9HD20 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP13A1Q9HD20 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP13A1Q9HD20 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP13A1Q9HD20 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP13A1Q9HD20 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP13A1Q9HD20 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 ELK2BP-201ENST00000415014 1224 ntBASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 IL9RP2-201ENST00000423948 1312 ntBASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP13A1Q9HD20 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 AC006504.4-201ENST00000592118 1568 ntBASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 AC073621.1-201ENST00000392730 636 ntBASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 AC098831.1-202ENST00000438821 336 ntBASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 AC136632.2-201ENST00000512891 861 ntBASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 AL356488.2-201ENST00000602755 427 ntBASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP13A1Q9HD20 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP13A1Q9HD20 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP13A1Q9HD20 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATP13A1Q9HD20 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ATP13A1Q9HD20 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP13A1Q9HD20 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.66■□□□□ 0.42
ATP13A1Q9HD20 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.66■□□□□ 0.42
ATP13A1Q9HD20 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.66■□□□□ 0.42
ATP13A1Q9HD20 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATP13A1Q9HD20 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ATP13A1Q9HD20 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP13A1Q9HD20 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP13A1Q9HD20 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATP13A1Q9HD20 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms