Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 LINC00167-201ENST00000530583 1419 ntBASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 HIST1H2APS4-201ENST00000362070 348 ntBASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 AP001412.1-201ENST00000608405 714 ntBASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC11.61□□□□□ -0.55
SND1-IT1Q9HBX3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 RHBDF1P1-201ENST00000427504 1941 ntBASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms