Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.08■□□□□ 0.81
SH2D4AQ9H788 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.08■□□□□ 0.81
SH2D4AQ9H788 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SH2D4AQ9H788 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SH2D4AQ9H788 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SH2D4AQ9H788 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.08■□□□□ 0.81
SH2D4AQ9H788 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.08■□□□□ 0.81
SH2D4AQ9H788 AC074386.1-202ENST00000463561 864 ntBASIC20.08■□□□□ 0.81
SH2D4AQ9H788 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
SH2D4AQ9H788 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.08■□□□□ 0.81
SH2D4AQ9H788 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.08■□□□□ 0.81
SH2D4AQ9H788 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.08■□□□□ 0.81
SH2D4AQ9H788 AL078644.1-201ENST00000609881 752 ntBASIC20.08■□□□□ 0.81
SH2D4AQ9H788 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.08■□□□□ 0.8
SH2D4AQ9H788 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SH2D4AQ9H788 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SH2D4AQ9H788 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.08■□□□□ 0.8
SH2D4AQ9H788 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.08■□□□□ 0.8
SH2D4AQ9H788 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SH2D4AQ9H788 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SH2D4AQ9H788 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SH2D4AQ9H788 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
SH2D4AQ9H788 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SH2D4AQ9H788 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.08■□□□□ 0.8
SH2D4AQ9H788 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SH2D4AQ9H788 ELL2P1-201ENST00000413990 1906 ntBASIC20.08■□□□□ 0.8
SH2D4AQ9H788 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SH2D4AQ9H788 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 AC254562.1-201ENST00000417586 456 ntBASIC20.07■□□□□ 0.8
SH2D4AQ9H788 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 FAM185BP-201ENST00000443595 716 ntBASIC20.07■□□□□ 0.8
SH2D4AQ9H788 ACTG1P14-201ENST00000446382 1122 ntBASIC20.07■□□□□ 0.8
SH2D4AQ9H788 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 SNHG9-202ENST00000564014 471 ntBASIC20.07■□□□□ 0.8
SH2D4AQ9H788 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH2D4AQ9H788 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
SH2D4AQ9H788 LYSMD4-203ENST00000378904 2122 ntBASIC20.06■□□□□ 0.8
SH2D4AQ9H788 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SH2D4AQ9H788 AC129492.6-201ENST00000611383 1305 ntBASIC20.06■□□□□ 0.8
SH2D4AQ9H788 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SH2D4AQ9H788 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SH2D4AQ9H788 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.06■□□□□ 0.8
SH2D4AQ9H788 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.06■□□□□ 0.8
SH2D4AQ9H788 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.06■□□□□ 0.8
SH2D4AQ9H788 AC090340.1-201ENST00000620778 4980 ntBASIC20.06■□□□□ 0.8
SH2D4AQ9H788 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SH2D4AQ9H788 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SH2D4AQ9H788 AC008764.6-201ENST00000595909 2069 ntBASIC20.06■□□□□ 0.8
SH2D4AQ9H788 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SH2D4AQ9H788 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SH2D4AQ9H788 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH2D4AQ9H788 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.05■□□□□ 0.8
SH2D4AQ9H788 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SH2D4AQ9H788 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH2D4AQ9H788 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH2D4AQ9H788 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH2D4AQ9H788 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SH2D4AQ9H788 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SH2D4AQ9H788 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SH2D4AQ9H788 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH2D4AQ9H788 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.05■□□□□ 0.8
SH2D4AQ9H788 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.05■□□□□ 0.8
SH2D4AQ9H788 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SH2D4AQ9H788 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SH2D4AQ9H788 PMS2P2-201ENST00000425039 1128 ntBASIC20.05■□□□□ 0.8
SH2D4AQ9H788 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SH2D4AQ9H788 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.05■□□□□ 0.8
SH2D4AQ9H788 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.05■□□□□ 0.8
SH2D4AQ9H788 CEND1P1-201ENST00000451006 455 ntBASIC20.05■□□□□ 0.8
SH2D4AQ9H788 AC087163.2-201ENST00000457299 853 ntBASIC20.05■□□□□ 0.8
SH2D4AQ9H788 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.05■□□□□ 0.8
SH2D4AQ9H788 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH2D4AQ9H788 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH2D4AQ9H788 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.05■□□□□ 0.8
SH2D4AQ9H788 AC133963.1-201ENST00000504166 1679 ntBASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms