Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PIF1Q9H611 AC009154.2-201ENST00000621177 724 ntBASIC16.55■□□□□ 0.24
PIF1Q9H611 AL023973.1-201ENST00000624619 620 ntBASIC16.55■□□□□ 0.24
PIF1Q9H611 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
PIF1Q9H611 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PIF1Q9H611 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PIF1Q9H611 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PIF1Q9H611 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PIF1Q9H611 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PIF1Q9H611 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.55■□□□□ 0.24
PIF1Q9H611 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PIF1Q9H611 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PIF1Q9H611 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PIF1Q9H611 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 AC073508.3-201ENST00000619697 1419 ntBASIC16.54■□□□□ 0.24
PIF1Q9H611 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PIF1Q9H611 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.54■□□□□ 0.24
PIF1Q9H611 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.54■□□□□ 0.24
PIF1Q9H611 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.54■□□□□ 0.24
PIF1Q9H611 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.54■□□□□ 0.24
PIF1Q9H611 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.54■□□□□ 0.24
PIF1Q9H611 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PIF1Q9H611 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 TERF1P1-201ENST00000311003 1181 ntBASIC16.54■□□□□ 0.24
PIF1Q9H611 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.54■□□□□ 0.24
PIF1Q9H611 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.54■□□□□ 0.24
PIF1Q9H611 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.54■□□□□ 0.24
PIF1Q9H611 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PIF1Q9H611 AC034232.1-201ENST00000506026 1064 ntBASIC16.54■□□□□ 0.24
PIF1Q9H611 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
PIF1Q9H611 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.54■□□□□ 0.24
PIF1Q9H611 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.54■□□□□ 0.24
PIF1Q9H611 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.54■□□□□ 0.24
PIF1Q9H611 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.54■□□□□ 0.24
PIF1Q9H611 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.54■□□□□ 0.24
PIF1Q9H611 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.54■□□□□ 0.24
PIF1Q9H611 AL136038.4-201ENST00000603606 1261 ntBASIC16.54■□□□□ 0.24
PIF1Q9H611 AL139327.4-201ENST00000612362 153 ntBASIC16.54■□□□□ 0.24
PIF1Q9H611 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.54■□□□□ 0.24
PIF1Q9H611 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.54■□□□□ 0.24
PIF1Q9H611 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.54■□□□□ 0.24
PIF1Q9H611 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PIF1Q9H611 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.54■□□□□ 0.24
PIF1Q9H611 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PIF1Q9H611 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.54■□□□□ 0.24
PIF1Q9H611 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.54■□□□□ 0.24
PIF1Q9H611 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PIF1Q9H611 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PIF1Q9H611 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
PIF1Q9H611 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.53■□□□□ 0.24
PIF1Q9H611 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PIF1Q9H611 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PIF1Q9H611 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.53■□□□□ 0.24
PIF1Q9H611 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PIF1Q9H611 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PIF1Q9H611 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
PIF1Q9H611 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PIF1Q9H611 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PIF1Q9H611 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PIF1Q9H611 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PIF1Q9H611 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PIF1Q9H611 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PIF1Q9H611 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PIF1Q9H611 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PIF1Q9H611 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
PIF1Q9H611 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.53■□□□□ 0.24
PIF1Q9H611 AC005104.2-201ENST00000427818 678 ntBASIC16.53■□□□□ 0.24
PIF1Q9H611 RASA4DP-201ENST00000460726 1199 ntBASIC16.53■□□□□ 0.24
PIF1Q9H611 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.53■□□□□ 0.24
PIF1Q9H611 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.53■□□□□ 0.24
PIF1Q9H611 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.53■□□□□ 0.24
PIF1Q9H611 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.53■□□□□ 0.24
PIF1Q9H611 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.53■□□□□ 0.24
PIF1Q9H611 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PIF1Q9H611 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms