Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.03■□□□□ 0.16
UBQLN3Q9H347 AC124067.4-201ENST00000519691 2379 ntBASIC16.03■□□□□ 0.16
UBQLN3Q9H347 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.03■□□□□ 0.16
UBQLN3Q9H347 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBQLN3Q9H347 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.03■□□□□ 0.16
UBQLN3Q9H347 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.03■□□□□ 0.16
UBQLN3Q9H347 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBQLN3Q9H347 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.03■□□□□ 0.16
UBQLN3Q9H347 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
UBQLN3Q9H347 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.03■□□□□ 0.16
UBQLN3Q9H347 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBQLN3Q9H347 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
UBQLN3Q9H347 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBQLN3Q9H347 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBQLN3Q9H347 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBQLN3Q9H347 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBQLN3Q9H347 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
UBQLN3Q9H347 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBQLN3Q9H347 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBQLN3Q9H347 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBQLN3Q9H347 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBQLN3Q9H347 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
UBQLN3Q9H347 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
UBQLN3Q9H347 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
UBQLN3Q9H347 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.02■□□□□ 0.16
UBQLN3Q9H347 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
UBQLN3Q9H347 AL049757.1-201ENST00000616842 1596 ntBASIC16.02■□□□□ 0.16
UBQLN3Q9H347 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.02■□□□□ 0.16
UBQLN3Q9H347 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.02■□□□□ 0.16
UBQLN3Q9H347 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBQLN3Q9H347 KRT18P67-201ENST00000432816 1264 ntBASIC16.02■□□□□ 0.16
UBQLN3Q9H347 FAM197Y8-203ENST00000450145 560 ntBASIC16.02■□□□□ 0.16
UBQLN3Q9H347 SCARNA2-201ENST00000458748 420 ntBASIC16.02■□□□□ 0.16
UBQLN3Q9H347 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
UBQLN3Q9H347 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
UBQLN3Q9H347 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
UBQLN3Q9H347 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.02■□□□□ 0.16
UBQLN3Q9H347 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBQLN3Q9H347 BX276092.7-203ENST00000637198 1536 ntBASIC16.02■□□□□ 0.15
UBQLN3Q9H347 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
UBQLN3Q9H347 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.02■□□□□ 0.15
UBQLN3Q9H347 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
UBQLN3Q9H347 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBQLN3Q9H347 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBQLN3Q9H347 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
UBQLN3Q9H347 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
UBQLN3Q9H347 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBQLN3Q9H347 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
UBQLN3Q9H347 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBQLN3Q9H347 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
UBQLN3Q9H347 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
UBQLN3Q9H347 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN3Q9H347 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN3Q9H347 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
UBQLN3Q9H347 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN3Q9H347 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN3Q9H347 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN3Q9H347 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN3Q9H347 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.01■□□□□ 0.15
UBQLN3Q9H347 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.01■□□□□ 0.15
UBQLN3Q9H347 AC018712.1-201ENST00000455767 687 ntBASIC16.01■□□□□ 0.15
UBQLN3Q9H347 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
UBQLN3Q9H347 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.01■□□□□ 0.15
UBQLN3Q9H347 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.01■□□□□ 0.15
UBQLN3Q9H347 AC064862.7-201ENST00000604520 867 ntBASIC16.01■□□□□ 0.15
UBQLN3Q9H347 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN3Q9H347 AL139288.1-201ENST00000623748 933 ntBASIC16.01■□□□□ 0.15
UBQLN3Q9H347 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN3Q9H347 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN3Q9H347 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.01■□□□□ 0.15
UBQLN3Q9H347 AL353593.2-201ENST00000602529 1483 ntBASIC16.01■□□□□ 0.15
UBQLN3Q9H347 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.01■□□□□ 0.15
UBQLN3Q9H347 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN3Q9H347 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
UBQLN3Q9H347 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN3Q9H347 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN3Q9H347 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
UBQLN3Q9H347 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN3Q9H347 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.01■□□□□ 0.15
UBQLN3Q9H347 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16■□□□□ 0.15
UBQLN3Q9H347 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBQLN3Q9H347 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBQLN3Q9H347 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
UBQLN3Q9H347 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16■□□□□ 0.15
UBQLN3Q9H347 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBQLN3Q9H347 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBQLN3Q9H347 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
UBQLN3Q9H347 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBQLN3Q9H347 AL356309.3-201ENST00000624132 1934 ntBASIC16■□□□□ 0.15
UBQLN3Q9H347 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
UBQLN3Q9H347 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBQLN3Q9H347 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16■□□□□ 0.15
UBQLN3Q9H347 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBQLN3Q9H347 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
UBQLN3Q9H347 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16■□□□□ 0.15
UBQLN3Q9H347 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16■□□□□ 0.15
UBQLN3Q9H347 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16■□□□□ 0.15
UBQLN3Q9H347 RNA5SP419-201ENST00000515908 135 ntBASIC16■□□□□ 0.15
UBQLN3Q9H347 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16■□□□□ 0.15
UBQLN3Q9H347 SART3-203ENST00000546611 1184 ntBASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms