Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 LINC00602-201ENST00000629776 2065 ntBASIC10.35□□□□□ -0.75
LIMD2Q9BT23 TCAF2P1-201ENST00000291129 2421 ntBASIC10.35□□□□□ -0.75
LIMD2Q9BT23 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 AC099343.3-201ENST00000605834 2503 ntBASIC10.35□□□□□ -0.75
LIMD2Q9BT23 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 SP100-208ENST00000427101 1922 ntTSL 2 BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 TK2-213ENST00000563369 882 ntTSL 5 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 TEN1-204ENST00000588202 862 ntTSL 3 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 AC139887.4-201ENST00000607877 719 ntBASIC10.34□□□□□ -0.75
LIMD2Q9BT23 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 LITAF-220ENST00000620789 692 ntTSL 5 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 AC011676.5-201ENST00000624864 2660 ntBASIC10.34□□□□□ -0.75
LIMD2Q9BT23 ABR-203ENST00000536794 2213 ntTSL 2 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 NARF-204ENST00000390006 1766 ntTSL 2 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC10.34□□□□□ -0.75
LIMD2Q9BT23 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms