Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PHOX2BQ99453 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PHOX2BQ99453 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.45■□□□□ 0.38
PHOX2BQ99453 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PHOX2BQ99453 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHOX2BQ99453 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PHOX2BQ99453 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.44■□□□□ 0.38
PHOX2BQ99453 AC009102.3-201ENST00000623118 1491 ntBASIC17.44■□□□□ 0.38
PHOX2BQ99453 FEM1AP3-201ENST00000403722 1741 ntBASIC17.44■□□□□ 0.38
PHOX2BQ99453 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.44■□□□□ 0.38
PHOX2BQ99453 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.44■□□□□ 0.38
PHOX2BQ99453 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.44■□□□□ 0.38
PHOX2BQ99453 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PHOX2BQ99453 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
PHOX2BQ99453 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PHOX2BQ99453 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHOX2BQ99453 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.44■□□□□ 0.38
PHOX2BQ99453 MTATP6P19-201ENST00000413797 659 ntBASIC17.44■□□□□ 0.38
PHOX2BQ99453 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.44■□□□□ 0.38
PHOX2BQ99453 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.44■□□□□ 0.38
PHOX2BQ99453 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.44■□□□□ 0.38
PHOX2BQ99453 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.44■□□□□ 0.38
PHOX2BQ99453 KRT18P65-201ENST00000439811 1286 ntBASIC17.44■□□□□ 0.38
PHOX2BQ99453 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PHOX2BQ99453 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PHOX2BQ99453 MIR4525-201ENST00000580000 75 ntBASIC17.44■□□□□ 0.38
PHOX2BQ99453 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PHOX2BQ99453 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHOX2BQ99453 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHOX2BQ99453 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PHOX2BQ99453 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PHOX2BQ99453 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHOX2BQ99453 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHOX2BQ99453 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHOX2BQ99453 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PHOX2BQ99453 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.44■□□□□ 0.38
PHOX2BQ99453 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.44■□□□□ 0.38
PHOX2BQ99453 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHOX2BQ99453 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PHOX2BQ99453 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHOX2BQ99453 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.44■□□□□ 0.38
PHOX2BQ99453 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.44■□□□□ 0.38
PHOX2BQ99453 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHOX2BQ99453 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHOX2BQ99453 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PHOX2BQ99453 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
PHOX2BQ99453 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHOX2BQ99453 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHOX2BQ99453 CROCCP3-202ENST00000420820 1947 ntBASIC17.43■□□□□ 0.38
PHOX2BQ99453 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHOX2BQ99453 AL133338.1-201ENST00000565695 1517 ntBASIC17.43■□□□□ 0.38
PHOX2BQ99453 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PHOX2BQ99453 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHOX2BQ99453 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHOX2BQ99453 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PHOX2BQ99453 PTCHD3P3-201ENST00000403073 906 ntBASIC17.43■□□□□ 0.38
PHOX2BQ99453 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHOX2BQ99453 AL020989.1-201ENST00000422979 469 ntBASIC17.43■□□□□ 0.38
PHOX2BQ99453 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PHOX2BQ99453 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.43■□□□□ 0.38
PHOX2BQ99453 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.43■□□□□ 0.38
PHOX2BQ99453 AC112191.1-201ENST00000523689 701 ntBASIC17.43■□□□□ 0.38
PHOX2BQ99453 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.43■□□□□ 0.38
PHOX2BQ99453 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.43■□□□□ 0.38
PHOX2BQ99453 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHOX2BQ99453 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.43■□□□□ 0.38
PHOX2BQ99453 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHOX2BQ99453 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PHOX2BQ99453 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHOX2BQ99453 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PHOX2BQ99453 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PHOX2BQ99453 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PHOX2BQ99453 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHOX2BQ99453 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHOX2BQ99453 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHOX2BQ99453 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHOX2BQ99453 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
PHOX2BQ99453 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
PHOX2BQ99453 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.43■□□□□ 0.38
PHOX2BQ99453 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.43■□□□□ 0.38
PHOX2BQ99453 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.43■□□□□ 0.38
PHOX2BQ99453 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.43■□□□□ 0.38
PHOX2BQ99453 AL390961.4-201ENST00000623958 2535 ntBASIC17.43■□□□□ 0.38
PHOX2BQ99453 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PHOX2BQ99453 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.42■□□□□ 0.38
PHOX2BQ99453 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
PHOX2BQ99453 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.42■□□□□ 0.38
PHOX2BQ99453 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHOX2BQ99453 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
PHOX2BQ99453 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHOX2BQ99453 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHOX2BQ99453 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PHOX2BQ99453 SSR1P1-201ENST00000407630 814 ntBASIC17.42■□□□□ 0.38
PHOX2BQ99453 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
PHOX2BQ99453 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.42■□□□□ 0.38
PHOX2BQ99453 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.42■□□□□ 0.38
PHOX2BQ99453 RBPMS2P1-201ENST00000437762 623 ntBASIC17.42■□□□□ 0.38
PHOX2BQ99453 SPDYE11-202ENST00000450699 704 ntBASIC17.42■□□□□ 0.38
PHOX2BQ99453 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.42■□□□□ 0.38
PHOX2BQ99453 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms