Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 FAM197Y8-203ENST00000450145 560 ntBASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 STK19B-204ENST00000512515 211 ntBASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 AC106886.4-201ENST00000623557 2502 ntBASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 AGGF1P2-201ENST00000426656 2106 ntBASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 PMPCAP1-201ENST00000508114 1576 ntBASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 AC003669.1-201ENST00000334569 611 ntBASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 SCARNA2-201ENST00000458748 420 ntBASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 AC073592.5-201ENST00000624854 528 ntBASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 AP000867.4-201ENST00000641616 219 ntBASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCC2Q8TAQ2 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 MRPL3P1-201ENST00000400109 1033 ntBASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 EGFEM1P-202ENST00000431685 1563 ntBASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCC2Q8TAQ2 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms